Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_2380 and Pf6N2E2_2381 are separated by 10 nucleotidesPf6N2E2_2381 and Pf6N2E2_2382 are separated by 197 nucleotidesPf6N2E2_2382 and Pf6N2E2_2383 are separated by 108 nucleotidesPf6N2E2_2383 and Pf6N2E2_2384 are separated by 295 nucleotides Pf6N2E2_2380 - Nitrate reductase (EC 1.7.99.4) (from data), at 2,817,700 to 2,820,417 _2380 Pf6N2E2_2381 - Uroporphyrinogen-III methyltransferase (EC 2.1.1.107), at 2,820,428 to 2,821,183 _2381 Pf6N2E2_2382 - Major porin and structural outer membrane porin OprF, at 2,821,381 to 2,822,415 _2382 Pf6N2E2_2383 - DNA-directed RNA polymerase specialized sigma subunit, sigma24-like, at 2,822,524 to 2,822,910 _2383 Pf6N2E2_2384 - CmpX, at 2,823,206 to 2,824,030 _2384
Group Condition Pf6N2E2_2380 Pf6N2E2_2381 Pf6N2E2_2382 Pf6N2E2_2383 Pf6N2E2_2384
nitrogen source nitrogen source nitrate 20mM -1.7 -1.2 N.D. N.D. -1.6
stress 4-Hydroxyacetophenone 0.00025 M -0.2 -1.3 N.D. N.D. -2.9
nitrogen source nitrogen source nitrate 5mM -1.8 -0.6 N.D. N.D. -1.9
nitrogen source nitrogen source nitrate 5mM -1.6 -0.9 N.D. N.D. -1.7
nitrogen source nitrogen source nitrite 5mM -0.7 -1.1 N.D. N.D. -2.4
nitrogen source nitrogen source nitrate 20mM -1.8 -0.6 N.D. N.D. -1.7
nitrogen source nitrate (N) -2.9 -0.9 N.D. N.D. -0.2
stress deoxycholate 0.0125 M -0.1 +0.1 N.D. N.D. -3.9
stress copper (II) chloride 3 mM -0.1 -0.5 N.D. N.D. -3.1
nitrogen source nitrogen source nitrite 0.5mM -0.3 -1.2 N.D. N.D. -2.2
stress 4-Hydroxyacetophenone 0.00025 M -0.3 -0.7 N.D. N.D. -2.5
stress Zinc chloride 0.0000015625 M +0.2 -0.4 N.D. N.D. -3.2
nitrogen source nitrate (N) -2.1 -0.7 N.D. N.D. -0.5
stress Bile salts 0.0125 M +0.1 +0.4 N.D. N.D. -3.7
stress RCH2 defined with Thallium(I) acetate 0.002 mg/ml +0.1 -1.6 N.D. N.D. -1.5
stress Chlorite 0.00005 M -0.2 -0.2 N.D. N.D. -2.7
nitrogen source nitrogen source Ammonium chloride 20mM -0.1 -0.8 N.D. N.D. -2.0
stress selenate 0.5 M +0.1 -0.1 N.D. N.D. -2.7
stress RCH2 defined with Nickel (II) chloride 0.04 mM +0.2 -1.0 N.D. N.D. -1.8
stress sodium iodate 0.005 M -0.0 +0.3 N.D. N.D. -2.7
stress Hydroxylamine 0.5 M +0.0 +0.4 N.D. N.D. -2.8
stress dimethyl sulfone 0.25 M +0.2 +0.5 N.D. N.D. -2.6
stress thiosulfate 0.25 M +0.2 +0.7 N.D. N.D. -1.9
stress molybdate 0.25 M +0.4 +1.0 N.D. N.D. -1.8
stress RCH2 defined with Cobalt chloride 0.04 mM +0.1 -1.0 N.D. N.D. +1.9
stress Rifampicin 0.003 mg/ml -0.1 -1.0 N.D. N.D. +2.8
carbon source D-Fructose (C) -0.2 -0.2 N.D. N.D. +3.2
carbon source m-Inositol (C) +0.0 +0.2 N.D. N.D. +3.4
carbon source D-Galactose (C) -0.1 +0.2 N.D. N.D. +4.8
carbon source D-Galactose (C) +0.2 +0.6 N.D. N.D. +4.8
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