Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_2361 and Pf6N2E2_2362 are separated by 475 nucleotidesPf6N2E2_2362 and Pf6N2E2_2363 overlap by 26 nucleotidesPf6N2E2_2363 and Pf6N2E2_2364 are separated by 4 nucleotidesPf6N2E2_2364 and Pf6N2E2_2365 are separated by 8 nucleotides Pf6N2E2_2361 - Type III secretion chaperone protein for YopD (SycD), at 2,796,383 to 2,796,865 _2361 Pf6N2E2_2362 - Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components), at 2,797,341 to 2,798,375 _2362 Pf6N2E2_2363 - Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components), at 2,798,350 to 2,799,153 _2363 Pf6N2E2_2364 - Type III secretion inner membrane protein (YscS,homologous to flagellar export components), at 2,799,158 to 2,799,412 _2364 Pf6N2E2_2365 - Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components), at 2,799,421 to 2,800,080 _2365
Group Condition Pf6N2E2_2361 Pf6N2E2_2362 Pf6N2E2_2363 Pf6N2E2_2364 Pf6N2E2_2365
motility inner cut, LB soft agar motility assay -0.2 -0.2 -1.3 N.D. +0.2
stress RCH2 defined with Nickel (II) chloride 0.04 mM -0.5 -0.4 -0.2 N.D. -0.2
stress Magnesium chloride 0.125 M +0.0 -0.3 -0.9 N.D. +0.0
stress antimonate 0.005 M -0.0 -0.5 -0.7 N.D. +0.1
stress periodate 0.00125 M +0.4 -1.0 -0.1 N.D. -0.2
stress deoxycholate 0.0125 M +0.2 -0.5 -1.0 N.D. +0.5
carbon source m-Inositol (C) -0.1 -0.7 -0.3 N.D. +0.3
nitrogen source L-Serine (N) -0.3 +0.8 -0.9 N.D. -0.3
carbon source Carbon source Sucrose 2.5 mM -0.4 +0.4 -0.3 N.D. -0.4
stress Chlorite 0.00005 M -0.3 -0.5 +0.4 N.D. -0.3
stress RCH2 defined with Zinc 0.016 mM -0.3 +0.4 -0.7 N.D. -0.1
stress Gjerstad humics 0.5 M -0.5 -0.4 +0.2 N.D. +0.2
nitrogen source L-Aspartic Acid (N) -0.5 -0.3 +0.4 N.D. +0.0
carbon source Ying_Nucleobase14 rep C; time point 1 -0.1 -0.8 +0.4 N.D. +0.2
nitrogen source L-Serine (N) -0.7 +0.5 +0.5 N.D. -0.4
stress Cobalt chloride 0.6 mM -0.1 -0.1 +0.8 N.D. -0.6
nitrogen source L-Arginine (N) -0.6 +0.3 +0.4 N.D. -0.2
vitamin No vitamins t1 -0.4 -0.1 +0.6 N.D. -0.2
stress Nickel (II) chloride 1 mM -0.5 -0.4 +0.8 N.D. +0.1
stress DEANONOate 0.000625 M -0.4 -0.3 +0.8 N.D. -0.1
stress RCH2 defined with Cobalt chloride 0.04 mM -0.5 +0.4 -0.2 N.D. +0.2
stress sodium iodate 0.005 M -0.6 -0.4 +0.6 N.D. +0.4
nitrogen source L-Asparagine (N) -0.5 +0.3 +0.4 N.D. -0.1
stress Vancomycin 0.12 mg/ml +0.1 +0.6 -0.4 N.D. +0.2
carbon source L-Arabinose (C) +0.1 +0.5 -0.4 N.D. +0.2
stress bromate 0.05 M -0.4 +0.1 +0.6 N.D. +0.2
stress Nickel (II) chloride 1 mM -0.3 +0.1 +0.8 N.D. -0.1
nitrogen source Putrescine (N) -0.5 +0.0 +0.9 N.D. +0.2
nitrogen source L-Isoleucine (N) +0.3 +0.1 +0.5 N.D. -0.2
carbon source D-Mannose (C) +0.2 +0.7 -0.3 N.D. +0.2
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