Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_2241 and Pf6N2E2_2242 overlap by 4 nucleotidesPf6N2E2_2242 and Pf6N2E2_2243 are separated by 131 nucleotidesPf6N2E2_2243 and Pf6N2E2_2244 are separated by 2 nucleotidesPf6N2E2_2244 and Pf6N2E2_2245 are separated by 132 nucleotides Pf6N2E2_2241 - Chromate transport protein ChrA, at 2,655,870 to 2,657,228 _2241 Pf6N2E2_2242 - tyrosine phosphatase, at 2,657,225 to 2,657,656 _2242 Pf6N2E2_2243 - RelE/StbE replicon stabilization toxin, at 2,657,788 to 2,658,102 _2243 Pf6N2E2_2244 - Putative merR family bacterial regulatory protein, at 2,658,105 to 2,658,392 _2244 Pf6N2E2_2245 - hypothetical protein, at 2,658,525 to 2,659,013 _2245
Group Condition Pf6N2E2_2241 Pf6N2E2_2242 Pf6N2E2_2243 Pf6N2E2_2244 Pf6N2E2_2245
carbon source Ying_Nucleobase14 rep B; time point 1 -0.6 N.D. -0.1 N.D. -0.2
carbon source Ying_AminoAcid20 rep C; time point 2 -0.1 N.D. -0.7 N.D. -0.0
carbon source Ying_AminoAcid20 rep B; time point 2 -0.3 N.D. -0.4 N.D. -0.1
carbon source Ying_Others16 rep B; time point 2 -0.3 N.D. -0.5 N.D. +0.0
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.1 N.D. -0.5 N.D. -0.1
carbon source Ying_Others16 rep C; time point 2 -0.3 N.D. -0.2 N.D. -0.2
stress phosphite 0.25 M -0.2 N.D. -0.2 N.D. -0.2
nitrogen source nitrogen source nitrate 20mM +0.1 N.D. -0.6 N.D. +0.1
nitrogen source nitrogen source nitrite 5mM +0.1 N.D. -0.5 N.D. -0.1
carbon source Ying_all64 rep B; time point 3 -0.4 N.D. -0.2 N.D. +0.2
lb LB no stress 48 hours +0.3 N.D. -0.8 N.D. +0.2
carbon source Ying_sugar7 rep C; time point 2 -0.4 N.D. +0.4 N.D. -0.3
stress Bile salts 0.0125 M +0.1 N.D. -0.5 N.D. +0.2
carbon source Ying_Others16 rep B; time point 3 -0.6 N.D. +0.3 N.D. +0.1
stress deoxycholate 0.0125 M -0.3 N.D. -0.1 N.D. +0.2
carbon source octanoate (C) -0.0 N.D. -0.4 N.D. +0.3
stress Cobalt chloride 0.4 mM +0.2 N.D. -0.6 N.D. +0.3
stress Nalidixic 0.004 mg/ml +0.3 N.D. -0.2 N.D. -0.2
stress Nickel (II) chloride 1.5 mM +0.1 N.D. -0.4 N.D. +0.3
carbon source L-Leucine (C) -0.2 N.D. +0.4 N.D. -0.1
carbon source L-Asparagine (C) -0.1 N.D. +0.4 N.D. -0.3
stress dimethyl sulfone 0.25 M -0.1 N.D. +0.4 N.D. -0.2
carbon source L-Leucine (C) -0.2 N.D. +0.4 N.D. -0.1
carbon source Carbon source Sucrose 5 mM +0.2 N.D. -0.4 N.D. +0.3
stress selenate 0.5 M +0.2 N.D. -0.2 N.D. +0.3
stress periodate 0.00125 M +0.2 N.D. +0.3 N.D. -0.2
carbon source D-Trehalose (C) +0.2 N.D. +0.4 N.D. -0.2
nitrogen source Cytidine (N) +0.1 N.D. +0.4 N.D. -0.1
motility inner cut, LB soft agar motility assay -0.1 N.D. +0.5 N.D. +0.2
carbon source L-Histidine (C) +0.1 N.D. +0.5 N.D. +0.0
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