Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 388 experiments or choose conditions or try the comparative fitness browser

500 ntPf6N2E2_2233 and Pf6N2E2_2234 are separated by 260 nucleotidesPf6N2E2_2234 and Pf6N2E2_2235 are separated by 170 nucleotidesPf6N2E2_2235 and Pf6N2E2_2236 are separated by 124 nucleotidesPf6N2E2_2236 and Pf6N2E2_2237 are separated by 117 nucleotides Pf6N2E2_2233 - Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25), at 2,645,420 to 2,646,241 _2233 Pf6N2E2_2234 - Virulence protein, at 2,646,502 to 2,646,852 _2234 Pf6N2E2_2235 - Xanthine permease, at 2,647,023 to 2,648,543 _2235 Pf6N2E2_2236 - N-hydroxyarylamine O-acetyltransferase (EC 2.3.1.118), at 2,648,668 to 2,649,492 _2236 Pf6N2E2_2237 - Exodeoxyribonuclease III (EC 3.1.11.2), at 2,649,610 to 2,650,404 _2237
Group Condition Pf6N2E2_2233 Pf6N2E2_2234 Pf6N2E2_2235 Pf6N2E2_2236 Pf6N2E2_2237
carbon source Ying_Nucleobase14 rep A; time point 3 -0.0 +0.0 -2.7 -0.3 +0.1
carbon source Ying_Nucleobase14 rep C; time point 3 -0.0 -0.1 -2.6 -0.2 +0.1
carbon source Ying_Nucleobase14 rep B; time point 3 -0.0 -0.1 -2.6 -0.1 +0.1
carbon source Ying_Nucleobase14 rep B; time point 2 +0.1 -0.2 -1.3 -0.5 -0.2
carbon source Ying_Nucleobase14 rep A; time point 2 +0.1 -0.1 -1.6 -0.2 -0.2
carbon source Ying_Nucleobase14 rep C; time point 2 +0.2 -0.1 -1.7 -0.1 -0.1
carbon source Ying_Nucleobase14 rep C; time point 1 +0.1 -0.1 -1.3 +0.1 -0.5
carbon source Carbon source Sucrose 5 mM -0.1 -0.3 -1.0 -0.1 +0.2
carbon source Carbon source D-Glucose 10 mM -0.0 +0.0 -1.1 +0.1 -0.1
carbon source Ying_sugar7 rep C; time point 2 +0.2 -0.3 -0.7 -0.1 -0.2
carbon source octanoate (C) -0.4 +0.0 -0.7 -0.2 +0.2
nitrogen source nitrogen source nitrite 1mM -0.3 +0.1 -0.5 -0.0 -0.4
carbon source Carbon source Sucrose 10 mM -0.1 +0.1 -0.8 -0.1 +0.1
nitrogen source nitrogen source nitrite 0.5mM -0.1 +0.1 -0.9 +0.2 +0.1
carbon source Carbon source D-Glucose 10 mM +0.0 +0.1 -1.0 +0.2 +0.1
stress Bile salts 0.0125 M -0.4 +0.3 -0.1 -0.6 +0.2
stress RCH2 defined with Cobalt chloride 0.04 mM -0.2 -0.1 +0.5 -0.4 -0.2
stress Cobalt chloride 0.4 mM +0.2 -0.2 -0.4 +0.3 -0.2
nitrogen source Gly-Glu (N) -0.5 -0.1 +0.2 +0.3 +0.1
nitrogen source L-Serine (N) -0.4 -0.2 +0.8 -0.1 -0.1
stress dimethyl sulfone 0.25 M +0.4 +0.1 +0.3 -0.1 -0.4
stress RCH2 defined with Nickel (II) chloride 0.04 mM +0.3 +0.2 -0.3 +0.2 -0.2
stress Nickel (II) chloride 1.5 mM +0.5 +0.0 -0.5 +0.0 +0.2
stress RCH2 defined with Cobalt chloride 0.04 mM -0.2 -0.2 +0.5 +0.3 -0.1
stress Hydroxylamine 0.5 M +0.0 -0.1 +0.7 +0.2 -0.5
lb LB no stress 48 hours +0.3 +0.3 -0.3 +0.4 -0.1
carbon source RCH2_defined -0.0 +0.1 +0.6 +0.2 -0.3
stress Chlorite 0.00005 M +0.3 +0.3 -0.2 +0.3 +0.1
stress Magnesium chloride 0.125 M +0.1 -0.0 +0.9 +0.2 -0.1
stress molybdate 0.25 M +0.2 +0.1 +0.7 +0.3 -0.1
remove
Pf6N2E2_2233
plot		 remove
Pf6N2E2_2234
plot		 remove
Pf6N2E2_2235		 remove
Pf6N2E2_2236
plot		 remove
Pf6N2E2_2237
plot