Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 388 experiments or choose conditions or try the comparative fitness browser

500 ntPf6N2E2_2215 and Pf6N2E2_2216 are separated by 148 nucleotidesPf6N2E2_2216 and Pf6N2E2_2217 are separated by 161 nucleotidesPf6N2E2_2217 and Pf6N2E2_2218 are separated by 107 nucleotidesPf6N2E2_2218 and Pf6N2E2_2219 are separated by 93 nucleotides Pf6N2E2_2215 - DNA-binding protein HU-beta, at 2,625,317 to 2,625,589 _2215 Pf6N2E2_2216 - ATP-dependent protease La (EC 3.4.21.53) Type I, at 2,625,738 to 2,628,134 _2216 Pf6N2E2_2217 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 2,628,296 to 2,629,579 _2217 Pf6N2E2_2218 - ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92), at 2,629,687 to 2,630,328 _2218 Pf6N2E2_2219 - Cell division trigger factor (EC 5.2.1.8), at 2,630,422 to 2,631,732 _2219
Group Condition Pf6N2E2_2215 Pf6N2E2_2216 Pf6N2E2_2217 Pf6N2E2_2218 Pf6N2E2_2219
carbon source Putrescine (C) N.D. N.D. -5.2 -4.5 -3.0
carbon source octanoate (C) N.D. N.D. -4.8 -3.2 -3.8
carbon source D-Alanine (C) N.D. N.D. -5.1 -5.4 -0.9
carbon source octanoate (C) N.D. N.D. -4.4 -3.2 -3.4
stress DEANONOate 0.000625 M N.D. N.D. -4.1 -3.1 -3.1
carbon source propionate (C) N.D. N.D. -4.1 -3.4 -2.4
carbon source Putrescine (C) N.D. N.D. -4.9 -5.3 +0.3
stress Hydroxylamine 0.5 M N.D. N.D. -3.8 -3.5 -2.1
stress DEANONOate 0.000625 M N.D. N.D. -5.0 -2.2 -1.9
carbon source propionate (C) N.D. N.D. -4.4 -3.1 -1.0
stress pyrophosphate 0.0025 M N.D. N.D. -2.8 -2.8 -2.9
stress 5-Hydroxymethylfurfural 10 mM N.D. N.D. -2.2 -4.4 -1.9
carbon source L-Leucine (C) N.D. N.D. -3.7 -3.6 -0.9
carbon source L-Leucine (C) N.D. N.D. -3.8 -3.5 -0.7
stress Chloride 600 mM N.D. N.D. -3.3 -1.9 -2.7
lb LB no stress 48 hours N.D. N.D. -1.9 -2.2 -3.9
stress Bile salts 0.0125 M N.D. N.D. -2.4 -3.1 -2.3
carbon source L-Phenylalanine (C) N.D. N.D. -4.8 -3.1 +0.2
carbon source Carnitine Hydrochloride (C) N.D. N.D. -2.8 -3.5 -1.3
nitrogen source L-Proline (N) N.D. N.D. -2.6 -4.2 -0.8
carbon source D-Alanine (C) N.D. N.D. -4.4 -3.0 +0.1
carbon source D-Xylose (C) N.D. N.D. -3.6 -2.8 +1.4
carbon source D-Xylose (C) N.D. N.D. -3.5 -2.5 +2.5
carbon source D-Galactose (C) N.D. N.D. -1.2 +2.2 +6.1
motility outer cut, LB soft agar motility assay N.D. N.D. +5.6 +1.8 +0.2
carbon source D-Galactose (C) N.D. N.D. -0.2 +1.9 +6.1
motility inner cut, LB soft agar motility assay N.D. N.D. +6.1 +3.0 -0.4
motility inner cut, LB soft agar motility assay N.D. N.D. +6.8 +3.8 -1.4
motility inner cut, LB soft agar motility assay N.D. N.D. +7.3 +3.3 -0.6
motility outer cut, LB soft agar motility assay N.D. N.D. +6.3 +2.4 +1.6
remove
Pf6N2E2_2215
plot		 remove
Pf6N2E2_2216
plot		 remove
Pf6N2E2_2217		 remove
Pf6N2E2_2218
plot		 remove
Pf6N2E2_2219
plot