Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_219 and Pf6N2E2_220 are separated by 2 nucleotidesPf6N2E2_220 and Pf6N2E2_221 are separated by 112 nucleotidesPf6N2E2_221 and Pf6N2E2_222 are separated by 2 nucleotidesPf6N2E2_222 and Pf6N2E2_223 overlap by 4 nucleotides Pf6N2E2_219 - Response regulator BaeR, at 277,022 to 277,705 _219 Pf6N2E2_220 - Sensory histidine kinase BaeS, at 277,708 to 279,126 _220 Pf6N2E2_221 - RND efflux system, membrane fusion protein CmeA, at 279,239 to 280,432 _221 Pf6N2E2_222 - RND efflux system, inner membrane transporter CmeB, at 280,435 to 283,581 _222 Pf6N2E2_223 - RND efflux system, outer membrane lipoprotein CmeC, at 283,578 to 284,975 _223
Group Condition Pf6N2E2_219 Pf6N2E2_220 Pf6N2E2_221 Pf6N2E2_222 Pf6N2E2_223
carbon source Ying_sugar7 rep B; time point 1 -0.8 -0.3 -0.1 +0.1 -0.1
nitrogen source L-Lysine (N) -0.2 -0.7 -0.1 +0.0 -0.3
nitrogen source nitrogen source nitrite 5mM -0.5 -0.2 +0.1 -0.3 -0.3
nitrogen source L-Serine (N) -0.7 -0.4 +0.1 +0.0 -0.1
stress DEANONOate 0.000625 M +0.0 -0.8 -0.2 -0.1 -0.1
carbon source Ying_Others16 rep A; time point 2 -1.0 -0.1 -0.2 -0.0 +0.2
nitrogen source nitrogen source nitrate 5mM -0.4 -0.8 +0.1 +0.0 +0.1
nitrogen source nitrogen source nitrate 5mM -0.1 -0.4 -0.2 -0.4 +0.1
stress Chloride 600 mM +0.1 -0.8 +0.2 -0.2 -0.3
stress Zinc chloride 0.0000015625 M +0.5 -1.2 +0.3 +0.1 -0.5
nitrogen source L-Aspartic Acid (N) -0.5 -0.5 +0.1 +0.0 -0.0
stress RCH2 defined with Cobalt chloride 0.02 mM -0.5 +0.4 -0.3 -0.0 -0.3
stress DEANONOate 0.000625 M -0.4 -0.8 +0.3 -0.0 +0.1
carbon source Carbon source Sucrose 10 mM -0.3 -0.7 +0.1 +0.1 +0.2
carbon source Carbon source D,L-Lactate 10 mM -0.7 -0.2 +0.2 +0.1 +0.0
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.7 +0.3 -0.0 -0.2 +0.0
nitrogen source nitrogen source nitrite 0.5mM -0.4 -0.3 -0.1 -0.2 +0.5
motility inner cut, LB soft agar motility assay -0.7 +0.6 -0.0 -0.2 +0.0
carbon source Ying_sugar7 rep B; time point 2 -0.2 -0.6 +0.2 +0.0 +0.2
carbon source Carbon source D,L-Lactate 10 mM -0.3 -0.5 +0.2 +0.1 +0.1
lb LB no stress 48 hours +0.4 -0.6 +0.3 +0.0 -0.2
nitrogen source L-Serine (N) +0.9 -0.5 +0.1 -0.1 -0.3
stress tellurite 0.005 M +0.3 -0.5 +0.1 -0.1 +0.3
stress Manganese (II) chloride tetrahydrate 0.00078125 M +0.4 -0.3 +0.1 -0.2 +0.1
lb LB no stress 48 hours +0.2 +0.4 +0.1 -0.2 -0.3
stress Magnesium chloride 0.125 M +0.3 +0.7 -0.2 -0.1 -0.1
stress arsenate 0.0005 M +0.3 +0.5 +0.1 +0.0 -0.2
stress Nickel (II) chloride 1.5 mM +0.3 +0.5 +0.0 +0.1 -0.2
stress phosphite 0.25 M +0.5 +0.4 +0.2 -0.0 -0.1
stress sodium carbonate 0.0125 M +0.5 -0.0 +0.4 +0.2 +0.0
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