Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_2199 and Pf6N2E2_2200 are separated by 168 nucleotidesPf6N2E2_2200 and Pf6N2E2_2201 overlap by 4 nucleotidesPf6N2E2_2201 and Pf6N2E2_2202 are separated by 24 nucleotidesPf6N2E2_2202 and Pf6N2E2_2203 are separated by 327 nucleotides Pf6N2E2_2199 - Catalase (EC 1.11.1.6), at 2,605,658 to 2,606,740 _2199 Pf6N2E2_2200 - RNA polymerase sigma-54 factor RpoN, at 2,606,909 to 2,607,415 _2200 Pf6N2E2_2201 - Transmembrane regulator protein PrtR, at 2,607,412 to 2,608,164 _2201 Pf6N2E2_2202 - Transcriptional regulator, IclR family, at 2,608,189 to 2,608,494 _2202 Pf6N2E2_2203 - Mobile element protein, at 2,608,822 to 2,610,090 _2203
Group Condition Pf6N2E2_2199 Pf6N2E2_2200 Pf6N2E2_2201 Pf6N2E2_2202 Pf6N2E2_2203
stress thiosulfate 0.25 M +0.0 -1.2 -3.1 N.D. N.D.
stress Hydroxylamine 0.5 M +0.2 -3.1 -0.9 N.D. N.D.
nitrogen source nitrogen source nitrite 1mM +0.0 -0.8 -2.8 N.D. N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate B -0.0 -1.9 -1.6 N.D. N.D.
stress tungstate 0.05 M -0.2 -2.1 -1.1 N.D. N.D.
stress dimethyl sulfone 0.25 M +0.1 +0.5 -3.8 N.D. N.D.
stress 4-Hydroxyacetophenone 0.00025 M -0.0 -1.4 -1.8 N.D. N.D.
stress 4-Hydroxyacetophenone 0.00025 M +0.1 -0.3 -2.9 N.D. N.D.
motility outer cut, LB soft agar motility assay +0.0 +0.6 -3.6 N.D. N.D.
stress molybdate 0.25 M +0.2 -1.2 -1.8 N.D. N.D.
stress Fluorophosphate 0.125 M +0.3 +0.1 -3.1 N.D. N.D.
nitrogen source nitrogen source nitrite 5mM +0.0 +0.5 -3.1 N.D. N.D.
nitrogen source Glucuronamide (N) -0.1 -2.9 +0.7 N.D. N.D.
motility inner cut, LB soft agar motility assay +0.1 +0.3 -2.6 N.D. N.D.
stress DEANONOate 0.000625 M +0.5 -3.2 +1.0 N.D. N.D.
stress Bile salts 0.0125 M +0.5 -2.3 +0.1 N.D. N.D.
nitrogen source nitrogen source nitrite 0.5mM -0.0 +0.9 -2.6 N.D. N.D.
nitrogen source nitrogen source nitrate 5mM +0.1 +0.6 -2.3 N.D. N.D.
stress Vanillyl Alcohol 0.005 M +0.1 +1.0 -2.5 N.D. N.D.
stress Chlorite 0.00005 M +0.0 +0.8 -2.2 N.D. N.D.
motility inner cut, LB soft agar motility assay +0.4 +0.5 -2.3 N.D. N.D.
nitrogen source L-Serine (N) +0.3 -2.2 +0.9 N.D. N.D.
stress Magnesium chloride 0.125 M +0.1 -1.9 +0.9 N.D. N.D.
stress molybdate 0.25 M +0.2 +1.1 -1.7 N.D. N.D.
carbon source D-Fructose (C) -0.0 -2.5 +2.9 N.D. N.D.
carbon source D-Galactose (C) -0.2 -1.6 +2.3 N.D. N.D.
carbon source D-Galactose (C) -0.0 -1.4 +2.3 N.D. N.D.
carbon source D-Glucosamine Hydrochloride (C) -0.1 -0.5 +2.4 N.D. N.D.
carbon source m-Inositol (C) -0.2 -0.3 +2.5 N.D. N.D.
carbon source D-Glucosamine Hydrochloride (C) +0.2 +0.3 +3.1 N.D. N.D.
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Pf6N2E2_2199
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