Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_2042 and Pf6N2E2_2043 are separated by 43 nucleotidesPf6N2E2_2043 and Pf6N2E2_2044 are separated by 60 nucleotidesPf6N2E2_2044 and Pf6N2E2_2045 are separated by 48 nucleotidesPf6N2E2_2045 and Pf6N2E2_2046 are separated by 198 nucleotides Pf6N2E2_2042 - Acetoacetyl-CoA synthetase (EC 6.2.1.16), at 2,431,553 to 2,433,508 _2042 Pf6N2E2_2043 - Twitching motility protein PilT, at 2,433,552 to 2,434,739 _2043 Pf6N2E2_2044 - Histidine kinase/response regulator hybrid protein, at 2,434,800 to 2,437,337 _2044 Pf6N2E2_2045 - Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8), at 2,437,386 to 2,437,661 _2045 Pf6N2E2_2046 - 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45), at 2,437,860 to 2,438,777 _2046
Group Condition Pf6N2E2_2042 Pf6N2E2_2043 Pf6N2E2_2044 Pf6N2E2_2045 Pf6N2E2_2046
stress RCH2 defined with Cobalt chloride 0.04 mM -0.1 -0.1 -0.3 -1.9 -0.3
stress Bile salts 0.0125 M -0.2 -0.5 +0.2 -2.3 +0.1
carbon source Carnitine Hydrochloride (C) -1.9 -0.4 +0.0 -0.1 -0.2
stress antimonate 0.005 M +0.0 -0.4 -0.1 -1.9 -0.1
carbon source Carnitine Hydrochloride (C) -1.7 -0.2 -0.0 -0.3 +0.1
stress Manganese (II) chloride tetrahydrate 0.00078125 M -0.2 -0.4 -0.2 -1.1 -0.0
stress tungstate 0.05 M +0.0 -0.4 +0.0 -1.5 +0.0
lb LB no stress 48 hours -0.2 -0.6 -0.1 -0.9 -0.1
stress Dimethyl Sulfoxide 7.5 vol% +0.0 -0.0 -1.3 -0.2 -0.3
nitrogen source Putrescine (N) -0.2 -0.2 -0.2 -1.2 +0.0
lb LB no stress 48 hours -0.0 -0.2 -0.1 -1.2 +0.2
stress Fluorophosphate 0.125 M +0.0 -0.7 +0.4 -1.0 +0.2
nitrogen source nitrogen source nitrite 5mM -0.0 +0.3 +0.3 -1.0 -0.2
stress deoxycholate 0.0125 M -0.3 -1.1 +0.5 -0.2 +0.6
stress Phosphomycin 0.004 mg/ml -0.1 -0.1 +0.6 -0.6 -0.2
carbon source octanoate (C) -0.2 -0.8 +0.4 -0.1 +0.3
stress dimethyl sulfone 0.25 M +0.2 +1.4 -1.0 -0.6 -0.1
carbon source Ying_Nucleobase14 rep C; time point 2 -0.0 +0.5 +0.5 -0.4 -0.3
stress DEANONOate 0.000625 M -0.2 -0.1 +1.1 -0.2 -0.2
carbon source D-Fructose (C) -0.1 -0.1 +0.9 -0.5 +0.3
nitrogen source nitrogen source nitrite 0.5mM -0.1 -0.4 +0.5 +0.6 +0.1
carbon source Carbon source Sucrose 10 mM -0.0 -0.6 +0.2 +1.1 -0.0
nitrogen source nitrogen source Ammonium chloride 20mM +0.0 +0.5 +0.6 -0.2 -0.3
carbon source Carbon source Sucrose 5 mM +0.1 -0.5 +0.1 +0.9 +0.1
stress copper (II) chloride 3 mM +0.1 -0.4 +0.5 +0.8 -0.1
carbon source m-Inositol (C) -0.2 -0.0 +1.3 +0.5 -0.5
carbon source D-Galactose (C) -0.0 +0.1 +2.0 +0.3 -0.5
nitrogen source nitrogen source nitrite 1mM +0.1 +0.5 +0.6 +0.4 +0.4
carbon source D-Galactose (C) -0.3 +0.5 +2.4 -0.3 +0.2
stress DEANONOate 0.000625 M +0.2 +0.4 +1.2 +0.9 +0.5
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