Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_1970 and Pf6N2E2_1971 overlap by 34 nucleotidesPf6N2E2_1971 and Pf6N2E2_1972 overlap by 4 nucleotidesPf6N2E2_1972 and Pf6N2E2_1973 are separated by 1 nucleotidesPf6N2E2_1973 and Pf6N2E2_1974 are separated by 151 nucleotides Pf6N2E2_1970 - Transcriptional regulator in PFGI-1-like cluster, at 2,336,937 to 2,337,107 _1970 Pf6N2E2_1971 - Protein with ParB-like nuclease domain in PFGI-1-like cluster, at 2,337,074 to 2,338,690 _1971 Pf6N2E2_1972 - FIG004780: hypothetical protein in PFGI-1-like cluster, at 2,338,687 to 2,339,247 _1972 Pf6N2E2_1973 - FIG141751: hypothetical protein in PFGI-1-like cluster, at 2,339,249 to 2,340,397 _1973 Pf6N2E2_1974 - FIG141694: hypothetical protein in PFGI-1-like cluster, at 2,340,549 to 2,341,340 _1974
Group Condition Pf6N2E2_1970 Pf6N2E2_1971 Pf6N2E2_1972 Pf6N2E2_1973 Pf6N2E2_1974
stress Zinc chloride 0.0000015625 M N.D. -0.5 -1.9 +0.2 -0.3
stress Cobalt chloride 0.4 mM N.D. -0.4 -1.2 -0.1 -0.6
stress Chloride 600 mM N.D. -0.3 -1.8 +0.1 -0.2
carbon source D-Trehalose (C) N.D. -0.3 -1.6 -0.2 -0.3
stress Bile salts 0.0125 M N.D. -0.0 -2.1 +0.3 -0.4
nitrogen source L-Serine (N) N.D. -0.1 -2.0 -0.1 +0.2
nitrogen source Glucuronamide (N) N.D. -0.2 -1.6 -0.1 +0.0
stress Cobalt chloride 0.6 mM N.D. -0.1 -1.0 +0.1 -0.8
stress Chromium(III) Chloride Hexahydrate 0.000390625 M N.D. -0.1 -1.0 +0.0 -0.7
nitrogen source Glycine (N) N.D. -0.1 -1.6 +0.0 +0.0
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A N.D. -0.1 -1.2 +0.0 -0.1
nitrogen source Gly-Glu (N) N.D. -0.3 -1.2 +0.1 +0.0
stress Nickel (II) chloride 1 mM N.D. -0.2 -0.6 +0.1 -0.6
stress Nickel (II) chloride 1.5 mM N.D. +0.1 -0.8 +0.0 -0.6
lb LB no stress 48 hours N.D. +0.1 -1.3 +0.1 -0.2
stress Nickel (II) chloride 1 mM N.D. +0.2 -0.7 -0.0 -0.8
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A N.D. -0.3 -1.0 +0.1 +0.1
nitrogen source L-Aspartic Acid (N) N.D. -0.2 -1.4 -0.0 +0.5
carbon source D-Trehalose (C) N.D. +0.0 -1.2 -0.0 +0.2
stress DEANONOate 0.000625 M N.D. +0.1 -0.9 +0.3 -0.3
stress RCH2 defined with Thallium(I) acetate 0.002 mg/ml N.D. +0.2 -0.3 +0.1 -0.8
nitrogen source nitrogen source nitrite 1mM N.D. -0.3 -0.8 -0.2 +0.6
stress phosphite 0.25 M N.D. +0.1 +0.9 -0.2 -0.4
nitrogen source nitrogen source nitrite 5mM N.D. -0.4 +0.3 -0.0 +0.9
nitrogen source nitrogen source nitrite 5mM N.D. -0.3 +0.9 -0.2 +0.4
nitrogen source nitrogen source nitrite 0.5mM N.D. -0.1 +1.0 -0.2 +0.1
nitrogen source nitrogen source Ammonium chloride 20mM N.D. -0.0 +1.2 -0.1 +0.1
nitrogen source nitrogen source nitrate 5mM N.D. -0.3 +0.6 +0.0 +1.0
stress Fusidic 0.4 mg/ml N.D. -0.2 +0.9 +0.1 +0.5
nitrogen source nitrogen source nitrate 5mM N.D. -0.1 +1.2 -0.0 +1.1
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