Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_1947 and Pf6N2E2_1948 are separated by 925 nucleotidesPf6N2E2_1948 and Pf6N2E2_1949 overlap by 4 nucleotidesPf6N2E2_1949 and Pf6N2E2_1950 are separated by 3 nucleotidesPf6N2E2_1950 and Pf6N2E2_1951 are separated by 395 nucleotides Pf6N2E2_1947 - Coenzyme PQQ synthesis protein E, at 2,307,590 to 2,308,759 _1947 Pf6N2E2_1948 - RND efflux system, outer membrane lipoprotein CmeC, at 2,309,685 to 2,311,109 _1948 Pf6N2E2_1949 - RND efflux system, inner membrane transporter CmeB, at 2,311,106 to 2,314,261 _1949 Pf6N2E2_1950 - RND efflux system, membrane fusion protein CmeA, at 2,314,265 to 2,315,449 _1950 Pf6N2E2_1951 - Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family, at 2,315,845 to 2,317,023 _1951
Group Condition Pf6N2E2_1947 Pf6N2E2_1948 Pf6N2E2_1949 Pf6N2E2_1950 Pf6N2E2_1951
stress Bile salts 0.0125 M -1.5 +0.2 -0.1 -0.2 -0.6
carbon source octanoate (C) -0.4 -0.5 -0.1 -0.3 -0.8
carbon source propionate (C) -0.6 -0.2 -0.1 -0.3 -0.3
carbon source octanoate (C) -0.1 -0.0 -0.1 -0.4 -0.7
vitamin With vitamins t2 -0.4 -0.3 -0.1 -0.4 -0.0
nitrogen source Glucuronamide (N) -0.9 -0.2 +0.0 +0.1 -0.2
motility inner cut, LB soft agar motility assay -0.2 -0.1 -0.2 -0.4 -0.4
carbon source propionate (C) -0.1 +0.0 -0.2 -0.2 -0.6
nitrogen source nitrogen source nitrite 5mM -0.4 -0.1 -0.0 +0.2 -0.6
carbon source Ying_sugar7 rep C; time point 2 -0.3 -0.1 -0.1 +0.2 -0.6
carbon source Carbon source Sucrose 10 mM -0.3 +0.1 +0.0 -0.9 +0.2
stress deoxycholate 0.0125 M -0.0 +0.2 -0.1 -0.3 -0.6
stress chromate 0.000005 M -0.6 +0.2 +0.1 -0.1 -0.2
stress Chloride 0.5 M -0.2 +0.1 +0.1 +0.1 -0.7
nitrogen source Urea (N) -0.2 -0.2 -0.2 -0.3 +0.3
stress Aluminum chloride 0.00005 M -0.8 +0.2 -0.1 +0.1 +0.0
lb LB no stress 48 hours -0.6 +0.3 +0.1 +0.1 -0.4
stress bromate 0.05 M +0.3 -0.2 -0.1 -0.6 +0.1
carbon source Carbon source Sucrose 5 mM +0.4 +0.2 -0.1 -0.2 -0.4
nitrogen source nitrogen source nitrate 5mM +0.2 +0.2 -0.1 +0.1 -0.6
nitrogen source nitrogen source nitrite 0.5mM +0.4 +0.1 -0.1 +0.1 -0.6
nitrogen source nitrogen source Ammonium chloride 20mM -0.6 +0.5 -0.1 +0.1 -0.0
nitrogen source nitrogen source nitrate 20mM +0.3 +0.3 -0.2 -0.4 +0.2
stress thiosulfate 0.25 M +0.2 +0.3 +0.2 +0.1 -0.5
lb LB no stress 48 hours -0.3 +0.4 -0.2 +0.1 +0.3
stress Chlorite 0.00005 M +0.5 +0.1 +0.2 -0.2 -0.3
nitrogen source L-Aspartic Acid (N) +0.6 -0.1 -0.1 -0.2 +0.3
nitrogen source nitrogen source nitrate 20mM +0.5 +0.2 +0.0 +0.2 -0.3
stress Hydroxylamine 0.5 M +0.8 +0.5 +0.1 -0.1 +0.0
stress Zinc chloride 0.0000015625 M -0.2 +0.3 +0.2 +0.6 +0.5
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