Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_1921 and Pf6N2E2_1922 overlap by 4 nucleotidesPf6N2E2_1922 and Pf6N2E2_1923 are separated by 284 nucleotidesPf6N2E2_1923 and Pf6N2E2_1924 are separated by 418 nucleotidesPf6N2E2_1924 and Pf6N2E2_1925 are separated by 52 nucleotides Pf6N2E2_1921 - hypothetical protein, at 2,274,895 to 2,275,032 _1921 Pf6N2E2_1922 - Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3), at 2,275,029 to 2,277,140 _1922 Pf6N2E2_1923 - Acetyl-CoA acetyltransferase, at 2,277,425 to 2,278,594 _1923 Pf6N2E2_1924 - 6-phosphogluconolactonase (EC 3.1.1.31), at 2,279,013 to 2,280,185 _1924 Pf6N2E2_1925 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 2,280,238 to 2,280,876 _1925
Group Condition Pf6N2E2_1921 Pf6N2E2_1922 Pf6N2E2_1923 Pf6N2E2_1924 Pf6N2E2_1925
nitrogen source nitrogen source nitrite 5mM N.D. -0.1 -0.4 -0.4 -0.5
motility inner cut, LB soft agar motility assay N.D. -0.4 -0.0 -0.1 -0.5
motility inner cut, LB soft agar motility assay N.D. -0.2 -0.2 -0.1 -0.5
carbon source Ying_sugar7 rep C; time point 2 N.D. -0.3 -0.2 +0.2 -0.7
carbon source Ying_OrganicAcid7 rep C; time point 3 N.D. -0.2 -0.0 -0.3 -0.3
carbon source Ying_Others16 rep C; time point 1 N.D. -0.1 -0.1 -0.2 -0.5
carbon source octanoate (C) N.D. +0.0 +0.1 -0.4 -0.6
stress DEANONOate 0.000625 M N.D. -0.3 -0.1 -0.5 +0.1
stress RCH2 defined with Nickel (II) chloride 0.04 mM N.D. -0.2 +0.0 -0.0 -0.7
stress RCH2 defined with Cobalt chloride 0.02 mM N.D. -0.3 +0.1 +0.1 -0.6
nitrogen source nitrogen source nitrate 20mM N.D. -0.5 +0.0 +0.1 -0.3
nitrogen source L-Serine (N) N.D. -0.5 +0.2 -0.2 -0.2
stress Chloride 600 mM N.D. +0.2 -0.1 -0.1 -0.6
carbon source Carbon source Sucrose 5 mM N.D. -0.3 +0.2 -0.2 -0.3
carbon source Ying_sugar7 rep B; time point 2 N.D. -0.3 -0.1 +0.3 -0.4
stress Chloride 500 mM N.D. -0.4 -0.2 -0.1 +0.2
stress RCH2 defined with Cobalt chloride 0.02 mM N.D. -0.3 +0.4 -0.1 -0.5
stress Cisplatin 0.008 mg/ml N.D. -0.2 +0.2 -0.3 -0.2
lb LB no stress 48 hours N.D. -0.4 -0.2 -0.0 +0.2
stress Cobalt chloride 0.16 mM N.D. +0.1 +0.1 -0.3 -0.4
vitamin With vitamins t1 N.D. -0.4 -0.4 -0.2 +0.5
carbon source Carbon source Sucrose 10 mM N.D. -0.5 +0.2 +0.2 -0.3
carbon source D-Galactose (C) N.D. -0.1 +0.2 -0.1 -0.4
motility inner cut, LB soft agar motility assay N.D. +0.2 +0.2 -0.3 -0.3
vitamin No vitamins t2 N.D. -0.3 -0.2 -0.0 +0.4
nitrogen source Glycine (N) N.D. +0.0 +0.4 -0.3 -0.1
stress RCH2 defined with Cobalt chloride 0.04 mM N.D. +0.0 +0.3 +0.4 -0.7
stress Hydroxylamine 0.5 M N.D. +0.4 +0.2 +0.0 -0.4
nitrogen source nitrogen source nitrate 5mM N.D. +0.3 +0.1 +0.3 +0.2
stress deoxycholate 0.0125 M N.D. +0.3 +0.4 -0.1 +0.6
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