Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_187 and Pf6N2E2_188 are separated by 132 nucleotidesPf6N2E2_188 and Pf6N2E2_189 are separated by 150 nucleotidesPf6N2E2_189 and Pf6N2E2_190 are separated by 14 nucleotidesPf6N2E2_190 and Pf6N2E2_191 are separated by 3 nucleotides Pf6N2E2_187 - Urea ABC transporter, ATPase protein UrtE, at 239,918 to 240,607 _187 Pf6N2E2_188 - Formamidase (EC 3.5.1.49), at 240,740 to 241,969 _188 Pf6N2E2_189 - regulatory protein, putative, at 242,120 to 242,353 _189 Pf6N2E2_190 - Aliphatic amidase AmiE (EC 3.5.1.4), at 242,368 to 243,411 _190 Pf6N2E2_191 - ClpB protein, at 243,415 to 244,458 _191
Group Condition Pf6N2E2_187 Pf6N2E2_188 Pf6N2E2_189 Pf6N2E2_190 Pf6N2E2_191
stress Hydroxide 0.05 M -0.5 -0.1 -0.9 -0.1 +0.1
carbon source Ying_sugar7 rep C; time point 1 -0.3 +0.3 -0.6 -0.1 -0.6
carbon source L-Leucine (C) +0.2 +0.2 -1.4 -0.1 -0.0
stress thiosulfate 0.25 M -0.6 -0.1 -0.7 +0.1 +0.2
nitrogen source nitrogen source Ammonium chloride 20mM +0.5 -0.4 -1.0 +0.2 -0.2
nitrogen source nitrogen source nitrite 5mM +0.4 -0.3 -1.3 +0.2 +0.0
stress deoxycholate 0.0125 M +0.6 -0.6 -0.9 -0.0 +0.1
stress perchlorate 0.125 M -0.2 +0.3 -1.1 +0.2 -0.1
stress 4-Hydroxyacetophenone 0.00025 M +0.1 +0.1 -1.2 +0.0 +0.3
stress Fusidic 0.4 mg/ml +0.4 -0.3 -1.0 +0.1 -0.0
nitrogen source L-Arginine (N) -0.3 -0.3 -0.6 +0.2 +0.3
stress Chloride 600 mM -0.0 +0.1 -1.2 +0.4 +0.1
nitrogen source nitrogen source nitrite 1mM +0.2 -0.3 -0.8 -0.0 +0.3
motility inner cut, LB soft agar motility assay +0.6 -0.3 -0.6 +0.0 -0.2
stress Bile salts 0.0125 M +0.6 -0.1 -0.8 +0.1 -0.2
stress sodium iodate 0.005 M +0.3 +0.3 -0.9 +0.1 -0.3
carbon source Ying_sugar7 rep B; time point 2 -1.0 +0.1 +0.3 +0.1 +0.2
stress selenite 0.0025 M -0.6 -0.1 +0.6 +0.2 -0.2
stress RCH2 defined with Cobalt chloride 0.04 mM -0.6 -0.0 +0.8 -0.1 -0.3
lb LB no stress 48 hours -0.2 +0.3 -0.7 +0.2 +0.4
stress DEANONOate 0.000625 M +0.5 -0.0 -0.8 +0.0 +0.3
nitrogen source Gly-Glu (N) +0.6 -0.4 -0.4 +0.2 +0.2
stress Hydroxide 0.05 M +0.3 +0.3 -0.9 +0.2 +0.1
nitrogen source Glucuronamide (N) -0.5 -0.4 +0.4 +0.3 +0.4
nitrogen source nitrogen source nitrate 20mM +0.3 -0.7 +0.6 -0.0 +0.3
stress dimethyl sulfone 0.25 M -0.6 +0.6 +0.2 -0.0 +0.3
nitrogen source nitrogen source nitrate 20mM +0.9 -0.4 +0.3 -0.1 +0.0
stress RCH2 defined with Nickel (II) chloride 0.04 mM +0.6 -0.4 +0.6 +0.0 -0.1
carbon source D-Fructose (C) -0.0 +0.9 -0.3 +0.1 +0.4
stress Hydroxylamine 0.5 M +1.2 +0.4 +0.4 +0.0 +0.2
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