Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_184 and Pf6N2E2_185 are separated by 10 nucleotidesPf6N2E2_185 and Pf6N2E2_186 overlap by 4 nucleotidesPf6N2E2_186 and Pf6N2E2_187 are separated by 10 nucleotidesPf6N2E2_187 and Pf6N2E2_188 are separated by 132 nucleotides Pf6N2E2_184 - Urea ABC transporter, permease protein UrtB, at 237,037 to 237,954 _184 Pf6N2E2_185 - Urea ABC transporter, permease protein UrtC, at 237,965 to 239,152 _185 Pf6N2E2_186 - Urea ABC transporter, ATPase protein UrtD, at 239,149 to 239,907 _186 Pf6N2E2_187 - Urea ABC transporter, ATPase protein UrtE, at 239,918 to 240,607 _187 Pf6N2E2_188 - Formamidase (EC 3.5.1.49), at 240,740 to 241,969 _188
Group Condition Pf6N2E2_184 Pf6N2E2_185 Pf6N2E2_186 Pf6N2E2_187 Pf6N2E2_188
nitrogen source nitrogen source nitrite 0.5mM +0.0 -0.9 -0.3 +0.2 -0.3
stress Nickel (II) chloride 1.5 mM -0.1 -0.2 -0.8 -0.4 +0.2
motility inner cut, LB soft agar motility assay -0.3 +0.2 -1.1 +0.1 -0.1
nitrogen source nitrogen source nitrate 20mM -0.2 -0.4 -0.2 +0.3 -0.7
nitrogen source Parabanic Acid (N) -0.3 -0.2 -0.8 -0.2 +0.2
carbon source Ying_sugar7 rep B; time point 2 -0.1 +0.1 -0.2 -1.0 +0.1
nitrogen source nitrogen source nitrite 5mM -0.0 -0.7 -0.5 +0.4 -0.3
stress Cobalt chloride 0.6 mM +0.1 +0.2 -0.4 -0.5 -0.4
vitamin With vitamins t1 +0.3 -0.3 -0.4 -0.5 +0.0
nitrogen source nitrogen source nitrate 20mM -0.4 -0.3 -0.6 +0.9 -0.4
nitrogen source Glucuronamide (N) -0.4 -0.2 +0.6 -0.5 -0.4
vitamin No vitamins t2 +0.1 -0.0 -0.7 -0.4 +0.3
stress thiosulfate 0.25 M +0.1 +0.4 -0.6 -0.6 -0.1
nitrogen source nitrogen source Ammonium chloride 20mM -0.1 -0.4 -0.2 +0.5 -0.4
stress molybdate 0.25 M +0.1 -0.0 -0.9 +0.3 -0.1
nitrogen source L-Serine (N) +0.2 -0.1 -0.3 +0.2 -0.6
stress dimethyl sulfone 0.25 M +0.3 -0.4 -0.3 -0.6 +0.6
nitrogen source L-Arginine (N) -0.2 +0.3 +0.3 -0.3 -0.3
carbon source octanoate (C) -0.1 -0.3 +0.4 -0.7 +0.3
stress sodium iodate 0.005 M +0.1 -0.1 -0.8 +0.3 +0.3
lb LB no stress 48 hours +0.0 +0.2 -0.3 -0.5 +0.4
carbon source Carbon source Sucrose 10 mM +0.2 -0.2 +0.4 -0.8 +0.3
stress Hans 1000x minerals +0.2 +0.4 -0.2 -0.7 +0.2
lb LB no stress 48 hours +0.2 +0.1 -0.4 -0.6 +0.5
stress deoxycholate 0.0125 M +0.4 -0.0 -0.3 +0.6 -0.6
stress tellurite 0.005 M +0.1 -0.1 +0.6 -0.6 +0.3
stress Cobalt chloride 0.6 mM +0.2 +0.4 -0.6 +0.1 +0.3
carbon source D-Glucosamine Hydrochloride (C) -0.2 +0.6 -0.2 +0.2 +0.4
motility inner cut, LB soft agar motility assay -0.1 +0.3 +0.5 +0.6 -0.3
stress Hydroxylamine 0.5 M -0.2 +0.5 +0.0 +1.2 +0.4
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