Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_1780 and Pf6N2E2_1781 are separated by 21 nucleotidesPf6N2E2_1781 and Pf6N2E2_1782 are separated by 16 nucleotidesPf6N2E2_1782 and Pf6N2E2_1783 are separated by 32 nucleotidesPf6N2E2_1783 and Pf6N2E2_1784 are separated by 11 nucleotides Pf6N2E2_1780 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 2,103,817 to 2,106,207 _1780 Pf6N2E2_1781 - Signal transduction histidine kinase CheA (EC 2.7.3.-), at 2,106,229 to 2,108,358 _1781 Pf6N2E2_1782 - STAS domain protein, at 2,108,375 to 2,108,692 _1782 Pf6N2E2_1783 - Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY, at 2,108,725 to 2,109,093 _1783 Pf6N2E2_1784 - Methyl-accepting chemotaxis protein, at 2,109,105 to 2,110,223 _1784
Group Condition Pf6N2E2_1780 Pf6N2E2_1781 Pf6N2E2_1782 Pf6N2E2_1783 Pf6N2E2_1784
stress RCH2 defined with copper (II) chloride 0.03 mM -0.0 +0.1 -0.7 -2.0 -3.5
stress RCH2 defined with Cobalt chloride 0.04 mM +0.1 -0.3 -0.7 -0.5 -1.7
nitrogen source nitrogen source nitrate 20mM +0.1 -0.1 -0.4 -1.0 -1.6
carbon source octanoate (C) -0.6 -0.0 +0.3 -0.9 -1.2
nitrogen source nitrogen source nitrite 5mM +0.0 -0.4 -0.2 -0.9 -1.0
stress RCH2 defined with Nickel (II) chloride 0.04 mM -0.6 -0.2 -0.3 -1.1 -0.1
stress Lomefloxacin 0.0002 mM +0.2 -0.3 -0.2 -1.3 -0.5
stress Chromium(III) Chloride Hexahydrate 0.000390625 M -0.2 +0.0 -1.1 -0.9 +0.3
stress Nalidixic 0.004 mg/ml +0.3 -0.1 -0.7 +0.1 -1.2
carbon source Ying_Others16 rep A; time point 2 +0.2 +0.4 -0.6 -0.8 -0.8
stress Chlorite 0.00005 M +0.3 +0.3 -1.0 -1.0 -0.2
carbon source Ying_Others16 rep A; time point 1 +0.2 +0.3 -0.6 -0.7 -0.8
carbon source Carbon source Sucrose 5 mM -0.2 -0.5 -1.0 +0.5 -0.3
stress Nickel (II) chloride 0.0025 M +0.2 -0.1 +0.3 -1.2 -0.6
lb LB no stress 48 hours +0.2 +0.3 -0.0 -0.5 -1.2
stress antimonate 0.005 M +0.4 -0.1 -0.9 -0.8 +0.3
stress RCH2 defined with Nickel (II) chloride 0.04 mM +0.1 +0.1 +0.5 -0.8 -0.9
stress RCH2 defined with copper (II) chloride 0.03 mM +0.0 -0.3 +0.4 -1.3 +0.2
carbon source L-Leucine (C) -0.1 +0.1 +0.8 -0.3 -1.3
stress Cobalt chloride 0.4 mM +0.3 -0.3 -0.2 -1.4 +0.9
stress Bile salts 0.0125 M +0.3 -0.1 -0.5 +1.5 -1.9
stress Fluorophosphate 0.125 M +0.3 -0.0 -0.7 +0.7 -0.7
carbon source Ying_AminoAcid20 rep A; time point 3 +0.1 +0.2 +0.8 -0.1 -1.1
nitrogen source nitrogen source nitrite 1mM -0.2 +0.1 +1.2 -0.3 -0.6
stress deoxycholate 0.0125 M +0.7 +0.3 -0.9 -0.0 +0.4
stress tungstate 0.05 M +0.2 -0.6 -0.3 +0.9 +0.4
motility inner cut, LB soft agar motility assay +0.2 +0.9 -0.9 +0.1 +0.3
nitrogen source L-Phenylalanine (N) +0.1 +0.2 +1.2 -0.5 +0.4
motility inner cut, LB soft agar motility assay -0.2 +0.8 +0.6 -0.2 +0.8
carbon source D-Trehalose (C) +0.4 -0.4 +1.3 +1.2 +0.6
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