Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 388 experiments or choose conditions or try the comparative fitness browser

500 ntPf6N2E2_1662 and Pf6N2E2_1663 are separated by 31 nucleotidesPf6N2E2_1663 and Pf6N2E2_1664 overlap by 4 nucleotidesPf6N2E2_1664 and Pf6N2E2_1665 overlap by 6 nucleotidesPf6N2E2_1665 and Pf6N2E2_1666 are separated by 210 nucleotides Pf6N2E2_1662 - 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase., at 1,968,970 to 1,969,818 _1662 Pf6N2E2_1663 - 2-keto-3-deoxy-L-fuconate dehydrogenase, at 1,969,850 to 1,970,590 _1663 Pf6N2E2_1664 - Nitrate/nitrite transporter, at 1,970,587 to 1,971,969 _1664 Pf6N2E2_1665 - hypothetical protein, at 1,971,964 to 1,972,113 _1665 Pf6N2E2_1666 - Transcriptional regulator, LysR family, at 1,972,324 to 1,973,262 _1666
Group Condition Pf6N2E2_1662 Pf6N2E2_1663 Pf6N2E2_1664 Pf6N2E2_1665 Pf6N2E2_1666
carbon source D-Xylose (C) -0.1 -0.7 -3.0 -3.8 -2.2
carbon source D-Xylose (C) +0.1 -0.9 -2.2 -2.5 -3.0
stress Zinc chloride 0.0000015625 M -0.9 -1.5 -0.1 -0.1 +0.6
nitrogen source L-Histidine (N) +0.1 -0.1 -0.5 -0.9 -0.4
stress Hydroxide 0.05 M +0.1 -0.5 -0.1 -0.8 -0.4
stress Hydroxylamine 0.5 M -0.9 -0.8 -0.2 -0.5 +0.8
carbon source Ying_Others16 rep C; time point 1 +0.3 +0.0 -0.2 -0.9 -0.5
stress Fluorophosphate 0.125 M -0.4 -0.0 -0.2 +0.7 -1.3
carbon source Ying_Others16 rep C; time point 2 +0.4 +0.2 -0.4 -0.9 -0.6
motility outer cut, LB soft agar motility assay -0.5 -0.7 -0.0 +0.4 -0.5
carbon source Ying_Others16 rep C; time point 3 +0.1 +0.2 -0.9 +0.1 -0.6
lb LB no stress 48 hours -0.7 -0.4 +0.4 -0.4 +0.5
carbon source Ying_all64 rep B; time point 3 +0.2 -0.1 -0.9 +0.6 -0.5
stress Nickel (II) chloride 1 mM -0.2 -0.1 -0.1 -0.9 +0.7
carbon source Ying_Nucleobase14 rep B; time point 3 +0.2 -0.4 -0.7 +0.4 -0.1
carbon source Ying_AminoAcid20 rep B; time point 3 +0.1 -0.0 -0.8 +0.6 -0.3
stress deoxycholate 0.0125 M -0.6 +0.1 +0.5 -0.7 +0.2
stress molybdate 0.25 M +0.1 -0.3 -0.1 -0.7 +0.7
stress Aluminum chloride 0.00005 M -0.6 +0.0 +0.2 -0.5 +0.8
vitamin With vitamins t2 -0.8 -0.2 -0.1 +0.2 +0.8
carbon source Ying_all64 rep A; time point 3 +0.2 -0.3 -1.0 +0.7 +0.3
stress Nickel (II) chloride 1.5 mM +0.6 -0.5 -0.4 +0.4 +0.2
stress Cobalt chloride 0.6 mM +0.5 -0.4 -0.3 -0.1 +0.7
stress Chloride 0.5 M -1.0 +0.2 +0.0 +0.7 +0.6
nitrogen source nitrogen source nitrate 5mM -0.4 -0.6 +0.4 +0.5 +0.7
motility inner cut, LB soft agar motility assay -0.5 +0.2 +0.5 +0.7 -0.3
vitamin No vitamins t2 -0.3 -0.5 +0.2 +1.1 +0.3
carbon source L-Leucine (C) +0.3 -0.4 -0.0 +0.6 +0.5
nitrogen source L-Asparagine (N) +0.2 -0.3 +0.4 +0.7 +0.4
stress Cobalt chloride 0.6 mM +0.7 -0.2 -0.3 +0.1 +1.0
remove
Pf6N2E2_1662
plot		 remove
Pf6N2E2_1663
plot		 remove
Pf6N2E2_1664		 remove
Pf6N2E2_1665
plot		 remove
Pf6N2E2_1666
plot