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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E2
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500 nt
Pf6N2E2_1531 and Pf6N2E2_1532 are separated by 45 nucleotides
Pf6N2E2_1532 and Pf6N2E2_1533 are separated by 28 nucleotides
Pf6N2E2_1533 and Pf6N2E2_1534 are separated by 19 nucleotides
Pf6N2E2_1534 and Pf6N2E2_1535 overlap by 4 nucleotides
Pf6N2E2_1531 - FIG146518: Zn-dependent hydrolases, including glyoxylases, at 1,791,331 to 1,792,209
_1531
Pf6N2E2_1532 - FIG003847: Oxidoreductase (flavoprotein), at 1,792,255 to 1,793,925
_1532
Pf6N2E2_1533 - membrane protein, putative, at 1,793,954 to 1,794,757
_1533
Pf6N2E2_1534 - Probable transmembrane protein, at 1,794,777 to 1,795,235
_1534
Pf6N2E2_1535 - GENE II AND X PROTEINS, at 1,795,232 to 1,795,657
_1535
Group
Condition
Pf6N2E2
_1531
Pf6N2E2
_1532
Pf6N2E2
_1533
Pf6N2E2
_1534
Pf6N2E2
_1535
nitrogen source
nitrogen source nitrate 5mM
+0.3
+0.2
-1.5
-2.3
N.D.
nitrogen source
nitrogen source nitrite 1mM
+0.2
+0.2
-1.3
-2.4
N.D.
nitrogen source
nitrogen source nitrate 20mM
-0.0
+0.0
-0.8
-2.3
N.D.
nitrogen source
nitrogen source nitrate 5mM
-0.0
+0.2
-0.8
-2.4
N.D.
nitrogen source
nitrogen source nitrate 20mM
+0.0
+0.1
-0.7
-2.4
N.D.
nitrogen source
nitrogen source nitrite 5mM
+0.0
-0.1
-0.4
-2.5
N.D.
nitrogen source
nitrogen source nitrite 0.5mM
+0.0
+0.1
-0.7
-2.3
N.D.
nitrogen source
nitrogen source nitrite 0.5mM
+0.0
+0.2
-0.7
-2.2
N.D.
nitrogen source
nitrogen source Ammonium chloride 20mM
-0.3
+0.1
-0.1
-2.3
N.D.
stress
Nickel (II) chloride 1.5 mM
-0.0
-0.1
+0.1
-2.7
N.D.
nitrogen source
nitrogen source nitrite 5mM
+0.1
+0.1
-0.5
-2.4
N.D.
stress
Cobalt chloride 0.6 mM
+0.2
+0.2
-0.6
-2.5
N.D.
nitrogen source
nitrogen source Ammonium chloride 20mM
-0.2
+0.1
+0.0
-2.4
N.D.
nitrogen source
nitrogen source nitrite 1mM
-0.3
+0.3
+0.1
-2.6
N.D.
stress
Nickel (II) chloride 1.5 mM
-0.3
-0.0
+0.0
-1.9
N.D.
carbon source
RCH2_defined
+0.2
-0.1
+0.1
-1.9
N.D.
stress
Cobalt chloride 0.6 mM
-0.0
-0.1
+0.4
-1.8
N.D.
carbon source
RCH2_defined
+0.1
-0.1
+0.2
-1.7
N.D.
stress
Chloride 600 mM
-0.3
+0.0
+0.3
-1.4
N.D.
stress
DEANONOate 0.000625 M
-0.3
+0.1
+0.3
-1.4
N.D.
stress
Magnesium chloride 0.125 M
+0.3
+0.1
-0.7
-0.8
N.D.
stress
Nickel (II) chloride 1 mM
+0.1
-0.1
+0.7
-1.5
N.D.
stress
Nickel (II) chloride 0.0025 M
-0.2
+0.5
+0.5
-1.3
N.D.
stress
Bile salts 0.0125 M
-0.7
+0.2
-1.1
+1.1
N.D.
nitrogen source
L-Proline (N)
-0.0
+0.0
-0.7
+1.2
N.D.
stress
antimonate 0.005 M
+1.0
+0.2
-1.4
+1.2
N.D.
stress
bromate 0.05 M
+0.6
+1.0
-0.2
-0.0
N.D.
vitamin
With vitamins t1
+0.8
+0.3
+0.9
-0.3
N.D.
stress
antimonate 0.005 M
+1.1
+0.5
-0.3
+1.4
N.D.
stress
selenite 0.0025 M
+5.7
+0.1
-0.4
+0.2
N.D.
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Pf6N2E2_1533
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