Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_1337 and Pf6N2E2_1338 are separated by 199 nucleotidesPf6N2E2_1338 and Pf6N2E2_1339 are separated by 181 nucleotidesPf6N2E2_1339 and Pf6N2E2_1340 overlap by 23 nucleotidesPf6N2E2_1340 and Pf6N2E2_1341 are separated by 10 nucleotides Pf6N2E2_1337 - Cys regulon transcriptional activator CysB, at 1,572,865 to 1,573,776 _1337 Pf6N2E2_1338 - ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1), at 1,573,976 to 1,575,016 _1338 Pf6N2E2_1339 - Acetylornithine deacetylase (EC 3.5.1.16), at 1,575,198 to 1,576,382 _1339 Pf6N2E2_1340 - major pilin protein fimA, at 1,576,360 to 1,577,034 _1340 Pf6N2E2_1341 - Bona fide RidA/YjgF/TdcF/RutC subgroup, at 1,577,045 to 1,577,431 _1341
Group Condition Pf6N2E2_1337 Pf6N2E2_1338 Pf6N2E2_1339 Pf6N2E2_1340 Pf6N2E2_1341
stress Chlorite 0.00005 M -0.8 -0.1 -2.7 +0.2 -0.3
stress Manganese (II) chloride tetrahydrate 0.00078125 M -0.8 -0.4 -0.6 -0.7 +0.0
stress Zinc chloride 0.0000015625 M -0.2 +0.4 -1.4 -1.0 -0.1
motility inner cut, LB soft agar motility assay +0.4 -0.2 -1.6 -0.9 +0.2
nitrogen source Putrescine (N) +0.2 -0.0 -1.5 -0.2 -0.5
stress Bile salts 0.0125 M -1.0 -0.3 +0.3 -0.9 -0.2
nitrogen source L-Histidine (N) -0.3 -0.5 -0.3 +0.1 -1.1
nitrogen source L-Serine (N) +0.1 -0.0 -0.8 -0.4 -0.8
nitrogen source L-Histidine (N) +0.4 -0.3 -0.1 -1.0 -0.6
stress Manganese (II) chloride tetrahydrate 0.00078125 M -0.4 -0.5 +0.6 -1.1 -0.3
stress DEANONOate 0.000625 M +0.3 +0.4 -1.0 -0.4 -0.8
nitrogen source L-Phenylalanine (N) +0.4 +0.0 -0.7 -0.7 -0.4
stress Chromium(III) Chloride Hexahydrate 0.000390625 M -0.1 -0.3 +0.4 -1.2 -0.2
stress Magnesium chloride 0.125 M -0.3 -0.2 -1.7 +0.7 +0.2
stress Fluorophosphate 0.125 M -1.0 -0.1 -0.5 +0.5 +0.2
stress tungstate 0.05 M +0.2 +0.2 -0.5 -1.1 +0.2
stress Vancomycin 0.12 mg/ml +0.5 +0.2 -0.7 -0.3 -0.5
nitrogen source L-Aspartic Acid (N) -0.9 -0.3 +0.7 +0.4 -0.7
stress Cobalt chloride 0.6 mM +0.6 -0.1 +0.1 -1.4 +0.2
nitrogen source L-Isoleucine (N) -0.0 -0.3 -0.5 +0.9 -0.5
carbon source D-Fructose (C) +0.2 +0.1 -0.6 -0.8 +0.7
stress RCH2 defined with copper (II) chloride 0.03 mM +0.8 -0.1 -1.0 +0.1 +0.2
stress Chloride 600 mM +0.2 +0.1 +1.4 -1.3 -0.2
stress RCH2 defined with Thallium(I) acetate 0.002 mg/ml +0.2 -0.1 +0.8 -1.5 +0.8
stress thiosulfate 0.25 M -0.8 +0.2 +1.3 -0.1 +0.2
stress RCH2 defined with Cobalt chloride 0.04 mM +0.2 -0.2 +1.2 +0.3 -0.6
lb LB no stress 48 hours +0.0 -0.2 +1.1 +0.7 -0.4
stress Cephalothin 4 mg/ml -0.5 +0.0 +0.6 +0.9 +0.2
stress molybdate 0.25 M -1.0 -0.1 +0.7 +1.2 +0.6
stress Doxycycline hyclate 0.0001 mg/ml +0.3 +0.2 +0.9 +0.4 +0.4
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