Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_1205 and Pf6N2E2_1206 are separated by 242 nucleotidesPf6N2E2_1206 and Pf6N2E2_1207 are separated by 212 nucleotidesPf6N2E2_1207 and Pf6N2E2_1208 are separated by 60 nucleotidesPf6N2E2_1208 and Pf6N2E2_1209 are separated by 37 nucleotides Pf6N2E2_1205 - Transcriptional regulator, AraC family, at 1,411,599 to 1,412,507 _1205 Pf6N2E2_1206 - protein of unknown function UPF0153, at 1,412,750 to 1,413,511 _1206 Pf6N2E2_1207 - Epoxide hydrolase (EC 3.3.2.9), at 1,413,724 to 1,414,797 _1207 Pf6N2E2_1208 - Epoxide hydrolase (EC 3.3.2.9), at 1,414,858 to 1,416,228 _1208 Pf6N2E2_1209 - hypothetical protein, at 1,416,266 to 1,416,523 _1209
Group Condition Pf6N2E2_1205 Pf6N2E2_1206 Pf6N2E2_1207 Pf6N2E2_1208 Pf6N2E2_1209
nitrogen source nitrogen source nitrite 0.5mM -0.2 -0.5 -0.3 -0.4 -0.7
stress Chloride 0.5 M -0.7 -0.1 -0.7 -0.4 +0.0
carbon source Ying_AminoAcid20 rep A; time point 2 -0.1 -0.1 -1.2 -0.0 -0.4
lb LB no stress 48 hours -0.6 -0.1 -1.0 -0.1 +0.0
stress deoxycholate 0.0125 M -0.6 -0.4 -0.7 +0.4 -0.5
motility outer cut, LB soft agar motility assay +0.1 -0.6 -0.5 -0.2 -0.5
lb LB no stress 24 hours -0.8 -0.1 -0.7 -0.1 +0.0
nitrogen source nitrogen source Ammonium chloride 20mM -0.1 -0.9 +0.0 -0.6 +0.1
carbon source Ying_OrganicAcid7 rep B; time point 2 +0.2 -0.3 -1.1 +0.0 -0.3
nitrogen source nitrogen source Ammonium chloride 20mM +0.1 -0.8 -0.3 -0.5 +0.1
nitrogen source nitrogen source nitrite 0.5mM -0.2 +0.1 -0.5 -0.2 -0.6
nitrogen source nitrogen source nitrite 5mM -0.0 -1.0 +0.1 -0.4 +0.1
stress selenate 0.5 M +0.1 +0.3 -0.9 -0.3 -0.3
stress Chloride 0.5 M -0.6 -0.1 -0.3 -0.3 +0.3
nitrogen source nitrogen source nitrate 5mM -0.4 -0.5 -0.3 +0.1 +0.3
nitrogen source nitrogen source nitrate 20mM -0.2 -0.6 -0.5 +0.4 -0.0
motility inner cut, LB soft agar motility assay -0.4 -0.5 +0.5 -0.0 -0.4
carbon source Ying_Others16 rep B; time point 2 +0.2 -0.0 -1.3 +0.0 +0.3
carbon source D-Galactose (C) -0.6 +0.3 +0.5 -0.6 -0.2
stress 4-Hydroxyacetophenone 0.00025 M -0.3 +0.4 +0.1 -0.3 -0.4
stress Vancomycin 0.24 mg/ml -0.0 -0.6 +0.7 -0.2 -0.4
stress Hydroxylamine 0.5 M +0.4 -0.1 -0.9 +0.1 +0.2
vitamin With vitamins t1 -0.3 -0.4 +0.3 -0.3 +0.5
carbon source Ying_sugar7 rep B; time point 2 +0.4 +0.5 -0.7 -0.4 +0.2
stress Cobalt chloride 0.6 mM +0.3 -0.5 -0.4 -0.1 +0.7
carbon source Carbon source D-Glucose 10 mM +0.4 +0.4 -0.7 -0.1 +0.1
stress Cobalt chloride 0.4 mM +0.4 -0.5 -0.2 +0.1 +0.5
carbon source Carbon source Sucrose 10 mM +1.1 +0.0 -0.1 -0.2 -0.4
stress periodate 0.00125 M -0.0 -0.5 +0.2 +0.4 +0.8
stress Zinc chloride 0.0000015625 M +0.2 +0.7 +0.3 +0.2 -0.2
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