Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_1112 and Pf6N2E2_1113 are separated by 154 nucleotidesPf6N2E2_1113 and Pf6N2E2_1114 are separated by 567 nucleotidesPf6N2E2_1114 and Pf6N2E2_1115 overlap by 1 nucleotidesPf6N2E2_1115 and Pf6N2E2_1116 are separated by 150 nucleotides Pf6N2E2_1112 - NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2, at 1,304,570 to 1,305,199 _1112 Pf6N2E2_1113 - Transcriptional regulator, TetR family, at 1,305,354 to 1,305,905 _1113 Pf6N2E2_1114 - Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4), at 1,306,473 to 1,309,034 _1114 Pf6N2E2_1115 - Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4), at 1,309,034 to 1,309,420 _1115 Pf6N2E2_1116 - Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205), at 1,309,571 to 1,310,011 _1116
Group Condition Pf6N2E2_1112 Pf6N2E2_1113 Pf6N2E2_1114 Pf6N2E2_1115 Pf6N2E2_1116
stress Bile salts 0.0125 M N.D. -0.4 +0.2 -0.1 -3.7
stress sodium iodate 0.005 M N.D. +0.3 +0.0 -0.3 -4.0
carbon source Carbon source D,L-Lactate 10 mM N.D. -1.3 +0.0 -0.2 -2.6
carbon source Carbon source D-Glucose 10 mM N.D. -1.4 -0.1 +0.2 -2.6
carbon source Carbon source D,L-Lactate 10 mM N.D. -0.6 +0.0 -0.2 -2.5
carbon source Carbon source Sucrose 5 mM N.D. -1.1 +0.1 +0.0 -2.3
nitrogen source nitrate (N) N.D. -0.8 -1.1 -1.0 +0.0
nitrogen source L-Serine (N) N.D. -0.7 -0.1 -0.5 -1.5
stress Nickel (II) chloride 0.5 mM N.D. -0.1 +0.1 -0.1 -2.6
nitrogen source nitrogen source nitrate 5mM N.D. -0.3 -1.0 -0.9 -0.3
stress Hydroxide 0.05 M N.D. -0.7 +0.1 -0.6 -1.2
carbon source Carbon source Sucrose 10 mM N.D. -2.3 -0.0 +0.1 -0.2
stress Lomefloxacin 0.0002 mM N.D. +0.3 +0.0 -0.4 -1.9
stress Fusidic 0.3 mg/ml N.D. -0.2 +0.2 +0.2 -2.2
stress Nalidixic 0.004 mg/ml N.D. -0.7 +0.1 +0.3 -1.6
nitrogen source nitrate (N) N.D. -0.1 -1.0 -1.3 +0.5
stress perchlorate 0.125 M N.D. +0.6 +0.0 -0.0 -2.5
stress tungstate 0.05 M N.D. +0.3 +0.0 +0.1 -2.3
motility outer cut, LB soft agar motility assay N.D. +0.5 -0.1 -0.8 -1.3
nitrogen source nitrogen source nitrate 20mM N.D. +1.0 -1.0 -1.3 -0.1
vitamin No vitamins t2 N.D. -0.7 +0.5 +0.5 -0.8
stress dimethyl sulfone 0.25 M N.D. +1.2 +0.1 +0.0 -1.8
stress RCH2 defined with Nickel (II) chloride 0.04 mM N.D. -1.9 +0.1 +0.2 +1.4
nitrogen source Gly-Glu (N) N.D. +0.3 +0.3 +0.5 -1.3
stress dimethyl sulfone 0.25 M N.D. +1.4 +0.3 -0.0 -1.3
stress RCH2 defined with copper (II) chloride 0.03 mM N.D. -0.8 +0.4 +0.3 +1.3
stress DEANONOate 0.000625 M N.D. -0.9 +0.2 +0.4 +1.6
stress Chlorite 0.00005 M N.D. +0.5 -0.1 -0.4 +1.5
stress Cobalt chloride 0.6 mM N.D. +1.0 -0.1 -0.3 +1.5
stress Cobalt chloride 0.6 mM N.D. +0.5 +0.2 -0.2 +1.9
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