Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 388 experiments or choose conditions or try the comparative fitness browser

500 ntPf6N2E2_106 and Pf6N2E2_107 are separated by 10 nucleotidesPf6N2E2_107 and Pf6N2E2_108 are separated by 48 nucleotidesPf6N2E2_108 and Pf6N2E2_109 are separated by 119 nucleotidesPf6N2E2_109 and Pf6N2E2_110 are separated by 188 nucleotides Pf6N2E2_106 - Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3), at 151,621 to 152,421 _106 Pf6N2E2_107 - Probable transmembrane protein, at 152,432 to 152,704 _107 Pf6N2E2_108 - Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3), at 152,753 to 154,495 _108 Pf6N2E2_109 - Hydrolases of the alpha/beta superfamily, at 154,615 to 155,490 _109 Pf6N2E2_110 - Cellobiose phosphotransferase system YdjC-like protein, at 155,679 to 156,461 _110
Group Condition Pf6N2E2_106 Pf6N2E2_107 Pf6N2E2_108 Pf6N2E2_109 Pf6N2E2_110
motility inner cut, LB soft agar motility assay -0.6 N.D. +0.0 -0.2 -0.6
carbon source Ying_Others16 rep B; time point 2 -0.6 N.D. -0.1 -0.1 -0.1
nitrogen source nitrogen source nitrate 5mM -0.3 N.D. -0.1 -0.2 -0.3
nitrogen source Cytidine (N) +0.1 N.D. -0.0 -0.2 -0.6
stress RCH2 defined with Nickel (II) chloride 0.04 mM -0.2 N.D. -0.0 +0.4 -0.5
stress Nickel (II) chloride 1.5 mM +0.4 N.D. -0.1 -0.4 -0.2
stress Nalidixic 0.004 mg/ml +0.3 N.D. -0.1 -0.5 +0.1
nitrogen source Glucuronamide (N) +0.3 N.D. -0.2 -0.2 -0.2
stress antimonate 0.005 M -0.1 N.D. -0.2 +0.4 -0.4
stress Nickel (II) chloride 1.5 mM -0.2 N.D. -0.1 -0.3 +0.4
nitrogen source Gly-Glu (N) +0.5 N.D. +0.1 -0.4 -0.2
nitrogen source L-Isoleucine (N) +0.2 N.D. -0.2 +0.3 -0.3
stress periodate 0.00125 M -0.2 N.D. -0.2 -0.1 +0.5
stress Magnesium chloride 0.125 M +0.3 N.D. -0.2 -0.2 +0.2
carbon source octanoate (C) -0.3 N.D. -0.1 +0.3 +0.2
nitrogen source nitrogen source nitrite 0.5mM +0.4 N.D. -0.2 -0.2 +0.1
stress Fluorophosphate 0.125 M +0.1 N.D. +0.0 -0.5 +0.5
stress dimethyl sulfone 0.25 M -0.4 N.D. +0.2 -0.0 +0.3
stress sodium carbonate 0.0125 M -0.4 N.D. +0.1 +0.2 +0.3
stress DEANONOate 0.000625 M +0.2 N.D. -0.0 +0.4 -0.3
stress pyrophosphate 0.0025 M -0.3 N.D. -0.1 +0.4 +0.2
stress Bile salts 0.0125 M -0.5 N.D. -0.0 -0.0 +0.7
stress deoxycholate 0.0125 M -0.3 N.D. +0.2 -0.1 +0.5
carbon source L-Leucine (C) +0.5 N.D. +0.2 -0.2 +0.1
stress bromate 0.05 M +0.1 N.D. -0.3 +0.3 +0.7
carbon source succinate (C) +0.4 N.D. +0.1 +0.1 +0.2
vitamin No vitamins t1 +0.1 N.D. +0.1 +0.3 +0.3
lb LB no stress 24 hours +0.2 N.D. +0.1 +0.2 +0.4
nitrogen source L-Aspartic Acid (N) +0.3 N.D. +0.1 +0.5 +0.3
nitrogen source nitrogen source nitrite 5mM +0.5 N.D. -0.2 +0.5 +0.6
remove
Pf6N2E2_106
plot
remove
Pf6N2E2_107
plot
remove
Pf6N2E2_108
remove
Pf6N2E2_109
plot
remove
Pf6N2E2_110
plot