Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_1058 and Pf6N2E2_1059 are separated by 90 nucleotidesPf6N2E2_1059 and Pf6N2E2_1060 are separated by 175 nucleotidesPf6N2E2_1060 and Pf6N2E2_1061 overlap by 26 nucleotidesPf6N2E2_1061 and Pf6N2E2_1062 are separated by 130 nucleotides Pf6N2E2_1058 - FIG000557: hypothetical protein co-occurring with RecR, at 1,233,980 to 1,235,377 _1058 Pf6N2E2_1059 - Phosphoglucomutase (EC 5.4.2.2), at 1,235,468 to 1,237,114 _1059 Pf6N2E2_1060 - Pirin, at 1,237,290 to 1,237,985 _1060 Pf6N2E2_1061 - hypothetical protein, at 1,237,960 to 1,238,091 _1061 Pf6N2E2_1062 - UvrD/REP helicase family protein, at 1,238,222 to 1,240,708 _1062
Group Condition Pf6N2E2_1058 Pf6N2E2_1059 Pf6N2E2_1060 Pf6N2E2_1061 Pf6N2E2_1062
stress copper (II) chloride 3 mM -0.1 -1.1 +0.2 N.D. +0.1
carbon source Ying_all64 rep A; time point 3 -0.4 -0.2 -0.1 N.D. +0.1
nitrogen source Glucuronamide (N) +0.1 -0.3 -0.3 N.D. -0.2
vitamin With vitamins t2 -0.2 +0.2 -0.1 N.D. -0.5
stress Bile salts 0.0125 M +0.0 -0.5 +0.2 N.D. -0.2
lb LB no stress 48 hours -0.4 -0.2 +0.1 N.D. +0.1
stress Cobalt chloride 0.4 mM -0.6 +0.2 -0.2 N.D. +0.1
motility inner cut, LB soft agar motility assay -0.2 +0.1 -0.4 N.D. +0.1
vitamin With vitamins t1 +0.0 +0.3 -0.4 N.D. -0.3
resistance 50% P. fluorescens FW300-N1B4 spent media from growth in 20 mM putrescine -0.4 +0.2 -0.0 N.D. -0.2
stress Nickel (II) chloride 1.5 mM -0.3 +0.3 -0.2 N.D. -0.2
nitrogen source nitrogen source nitrite 0.5mM +0.2 -0.1 -0.2 N.D. -0.2
stress Manganese (II) chloride tetrahydrate 0.00078125 M -0.3 +0.2 +0.1 N.D. -0.3
stress deoxycholate 0.0125 M +0.2 -0.5 +0.1 N.D. -0.1
nitrogen source L-Glutamine (N) -0.1 +0.1 -0.4 N.D. +0.2
nitrogen source nitrogen source nitrate 5mM +0.2 +0.2 -0.5 N.D. -0.1
stress Nickel (II) chloride 1 mM -0.4 +0.6 -0.1 N.D. -0.2
stress Nickel (II) chloride 1 mM -0.1 +0.5 -0.2 N.D. -0.2
stress Lomefloxacin 0.0002 mM -0.1 +0.2 +0.2 N.D. -0.4
stress DEANONOate 0.000625 M -0.3 +0.1 +0.3 N.D. -0.1
nitrogen source L-Serine (N) -0.2 +0.5 -0.2 N.D. +0.0
stress Vancomycin 0.24 mg/ml -0.0 +0.5 -0.0 N.D. -0.3
carbon source RCH2_defined -0.2 +0.3 -0.1 N.D. +0.2
stress RCH2 defined with copper (II) chloride 0.03 mM +0.4 +0.2 -0.3 N.D. -0.1
stress RCH2 defined with Nickel (II) chloride 0.04 mM +0.4 -0.2 +0.2 N.D. +0.0
carbon source D-Xylose (C) -0.2 +0.6 +0.0 N.D. -0.0
stress Nickel (II) chloride 1 mM -0.4 +0.7 -0.0 N.D. +0.2
carbon source D-Xylose (C) -0.3 +0.9 -0.1 N.D. -0.1
stress bromate 0.05 M +0.2 +0.2 +0.1 N.D. +0.3
stress Nickel (II) chloride 0.0025 M +0.2 +0.4 +0.2 N.D. +0.0
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Pf6N2E2_1058
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Pf6N2E2_1059
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Pf6N2E2_1061
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