Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_96 and Pf1N1B4_97 overlap by 1 nucleotidesPf1N1B4_97 and Pf1N1B4_98 are separated by 535 nucleotidesPf1N1B4_98 and Pf1N1B4_99 are separated by 24 nucleotidesPf1N1B4_99 and Pf1N1B4_100 are separated by 308 nucleotides Pf1N1B4_96 - Selenophosphate-dependent tRNA 2-selenouridine synthase, at 100,858 to 101,961 _96 Pf1N1B4_97 - Selenide,water dikinase (EC 2.7.9.3), at 101,961 to 102,995 _97 Pf1N1B4_98 - Nucleoside-specific channel-forming protein Tsx precursor, at 103,531 to 104,487 _98 Pf1N1B4_99 - Purine nucleoside permease, at 104,512 to 105,546 _99 Pf1N1B4_100 - FIG00953437: hypothetical protein, at 105,855 to 106,082 _100
Group Condition Pf1N1B4_96 Pf1N1B4_97 Pf1N1B4_98 Pf1N1B4_99 Pf1N1B4_100
temperature LB 37C -0.3 -0.3 -1.0 -0.6 N.D.
denitrifying Nitrate reduction, replicate B t2 -0.5 -1.3 -0.2 +0.1 N.D.
carbon source carbon source Sucrose 5mM -0.7 -0.8 +0.1 +0.0 N.D.
anaerobic Nitrate reduction -0.1 -0.4 -0.2 -0.6 N.D.
carbon source carbon source Sucrose 1mM -0.6 -0.4 +0.3 -0.6 N.D.
nitrogen source nitrogen source nitrate 5mM -0.4 -0.8 +0.2 -0.1 N.D.
temperature LB 37C -0.5 -0.3 +0.2 -0.4 N.D.
anaerobic Nitrate reduction -0.9 +0.1 -0.3 +0.1 N.D.
denitrifying Nitrate reduction, replicate B t1 -0.1 -0.9 -0.2 +0.3 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B -0.5 -0.2 +0.1 -0.2 N.D.
carbon source carbon source Sucrose 0.25mM +0.2 -0.3 -0.1 -0.5 N.D.
nitrogen source nitrogen source nitrite 0.1mM -0.3 -0.3 +0.2 -0.4 N.D.
denitrifying Nitrate reduction, replicate C t3 +0.1 -1.0 +0.3 -0.2 N.D.
stress nitrate 100 mM -0.4 -0.3 +0.4 -0.3 N.D.
carbon source L-Arabinose (C) -0.3 -0.2 +0.2 -0.3 N.D.
carbon source carbon source Sucrose 5mM +0.1 -0.5 +0.2 -0.4 N.D.
denitrifying Nitrate reduction, replicate A t2 -0.0 -0.8 +0.4 +0.0 N.D.
denitrifying Nitrate reduction, replicate C +0.2 -0.7 +0.3 -0.3 N.D.
carbon source D-Galactose (C) -0.8 +0.2 +0.3 -0.1 N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 +0.2 -0.8 +0.8 -0.5 N.D.
denitrifying Nitrate reduction, replicate C t1 +0.3 -0.5 +0.3 -0.1 N.D.
denitrifying Nitrate reduction, replicate A t1 +0.1 -0.7 +0.1 +0.5 N.D.
denitrifying Nitrate reduction, replicate C t2 +0.4 -0.6 +0.2 -0.0 N.D.
nitrogen source D-Alanine (N) -0.3 -0.2 +0.4 +0.2 N.D.
stress Bacitracin 2 mg/ml -0.1 +0.3 -0.1 +0.6 N.D.
nitrogen source Uridine (N) -0.4 +0.5 +0.1 +0.6 N.D.
nitrogen source Cytosine (N) +0.3 +0.2 -0.0 +0.5 N.D.
carbon source D-Galactose (C) -0.0 +0.4 +0.2 +0.5 N.D.
anaerobic N2E2wt with N1B4m denitrifying repB +0.1 +0.2 +0.2 +0.7 N.D.
stress Doxycycline hyclate 0.0001 mg/ml +0.3 +0.6 +0.3 +0.1 N.D.
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