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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N1B4
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Pf1N1B4_922 and Pf1N1B4_923 are separated by 92 nucleotides
Pf1N1B4_923 and Pf1N1B4_924 are separated by 124 nucleotides
Pf1N1B4_924 and Pf1N1B4_925 are separated by 236 nucleotides
Pf1N1B4_925 and Pf1N1B4_926 are separated by 147 nucleotides
Pf1N1B4_922 - Sarcosine oxidase beta subunit (EC 1.5.3.1), at 1,047,315 to 1,048,442
_922
Pf1N1B4_923 - YheO-like PAS domain, at 1,048,535 to 1,049,176
_923
Pf1N1B4_924 - Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein, at 1,049,301 to 1,050,077
_924
Pf1N1B4_925 - Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17), at 1,050,314 to 1,051,495
_925
Pf1N1B4_926 - Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR, at 1,051,643 to 1,053,196
_926
Group
Condition
Pf1N1B4
_922
Pf1N1B4
_923
Pf1N1B4
_924
Pf1N1B4
_925
Pf1N1B4
_926
stress
Fusidic 0.125 mg/ml
-0.4
-0.1
-0.5
-0.3
+0.0
stress
methylglyoxal 0.004 vol%
-0.3
-0.1
-0.4
-0.1
-0.3
carbon source
L-Arabinose (C)
+0.1
-0.6
-0.1
-0.2
-0.3
stress
Choline Lysine 6 mM
+0.0
-0.2
-0.1
-0.2
-0.5
carbon source
carbon source Sucrose 1mM
-0.4
-0.1
-0.1
-0.3
-0.1
stress
Choline chloride 200 mM
-0.1
-0.1
-0.4
-0.3
+0.0
carbon source
L-Leucine (C)
+0.1
-0.6
-0.1
-0.1
-0.2
nitrogen source
Ammonium chloride (N)
+0.1
-0.1
-0.2
-0.3
-0.2
stress
1-ethyl-3-methylimidazolium chloride 80 mM
+0.2
-0.2
-0.0
-0.3
-0.3
stress
sodium fluoride 12.5 mM
+0.2
-0.1
-0.2
+0.0
-0.4
stress
nitrite 10 mM
-0.4
+0.1
+0.3
-0.2
-0.2
stress
nitrite 10 mM
+0.1
+0.1
+0.1
-0.4
-0.3
carbon source
D-Galactose (C)
+0.4
-0.2
-0.3
+0.0
-0.3
carbon source
carbon source Sucrose 0.25mM
-0.6
+0.6
+0.6
-0.7
-0.1
carbon source
D-Galactose (C)
+0.3
-0.3
+0.2
-0.1
-0.3
temperature
LB 37C
-0.1
+0.5
-0.5
-0.2
+0.2
anaerobic
N2E2wt with N1B4m denitrifying repA
+0.4
+0.0
-0.4
+0.0
-0.3
carbon source
D-Lactate (C)
+0.4
-0.2
-0.2
+0.1
-0.3
stress
Cisplatin 0.006 mg/ml
+0.2
+0.4
-0.2
+0.0
-0.4
denitrifying
Nitrate reduction, replicate C t3
+0.1
+0.3
+0.1
-0.1
-0.4
carbon source
octanoate (C)
+0.4
+0.1
-0.5
+0.1
-0.1
carbon source
D,L-Lactate (C)
+0.4
-0.3
+0.2
+0.1
-0.2
nitrogen source
L-Methionine (N)
+0.2
-0.2
-0.2
-0.0
+0.4
carbon source
Fumarate (C)
+0.3
+0.1
-0.1
+0.1
-0.3
carbon source
carbon source Sucrose 5mM
+0.1
-0.2
+0.1
-0.2
+0.4
pH
Minimal media pH9
-0.3
+0.3
-0.1
+0.2
+0.1
carbon source
carbon source Sucrose 0.5mM
-0.2
+0.3
+0.3
+0.2
-0.0
nitrogen source
nitrogen source nitrite 0.5mM
-0.2
+0.1
+0.3
+0.2
+0.2
nitrogen source
L-Lysine (N)
-0.0
-0.3
+1.2
-0.1
+0.1
temperature
LB 37C
+0.0
+0.5
+0.2
+0.2
+0.2
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