Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_876 and Pf1N1B4_877 are separated by 248 nucleotidesPf1N1B4_877 and Pf1N1B4_878 overlap by 49 nucleotidesPf1N1B4_878 and Pf1N1B4_879 are separated by 112 nucleotidesPf1N1B4_879 and Pf1N1B4_880 are separated by 94 nucleotides Pf1N1B4_876 - Magnesium and cobalt efflux protein CorC, at 1,001,559 to 1,002,803 _876 Pf1N1B4_877 - Permeases of the major facilitator superfamily, at 1,003,052 to 1,003,864 _877 Pf1N1B4_878 - Permeases of the major facilitator superfamily, at 1,003,816 to 1,004,367 _878 Pf1N1B4_879 - Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-), at 1,004,480 to 1,005,661 _879 Pf1N1B4_880 - Putative preQ0 transporter, at 1,005,756 to 1,006,229 _880
Group Condition Pf1N1B4_876 Pf1N1B4_877 Pf1N1B4_878 Pf1N1B4_879 Pf1N1B4_880
carbon source carbon source Sucrose 1mM -2.2 -0.2 N.D. +0.1 -0.1
carbon source carbon source Sucrose 0.25mM -1.1 -0.1 N.D. -0.3 -0.2
stress Thallium(I) acetate 0.008 mg/ml -0.4 -0.1 N.D. -0.3 -0.9
carbon source carbon source Sucrose 0.5mM -1.7 +0.5 N.D. -0.1 -0.4
stress Thallium(I) acetate 0.008 mg/ml -0.7 +0.2 N.D. +0.1 -1.3
stress Tetracycline 0.0004 mg/ml -1.1 -0.0 N.D. -0.3 -0.2
stress Sisomicin 0.001 mg/ml -0.3 -1.0 N.D. -0.0 -0.1
carbon source carbon source Sucrose 0.25mM -1.3 +0.2 N.D. -0.0 -0.3
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 -0.5 -0.4 N.D. -0.3 -0.1
phagefrs Time6-FRS -0.7 +0.1 N.D. -0.1 -0.5
nitrogen source nitrogen source nitrite 0.5mM -0.3 +0.2 N.D. -0.7 -0.3
stress Benzethonium chloride 0.0125 mM -0.7 -0.4 N.D. -0.1 +0.3
lb LB -0.8 -0.4 N.D. +0.0 +0.3
stress nitrate 100 mM +0.4 -0.1 N.D. -0.9 -0.2
carbon source carbon source Sucrose 5mM -1.6 +0.4 N.D. +0.4 +0.1
anaerobic Nitrate reduction -0.7 -0.1 N.D. -0.3 +0.5
phagefrs Time6-FRS -0.4 +0.3 N.D. -0.5 +0.1
denitrifying Nitrate reduction, replicate C t1 +0.7 -0.2 N.D. -0.3 -0.3
carbon source D-Lactate (C) +0.3 +0.3 N.D. -0.6 -0.2
stress Spectinomycin 0.025 mg/ml -0.7 +0.3 N.D. +0.1 +0.3
nitrogen source nitrate (N) +0.2 +0.3 N.D. -0.6 +0.2
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 +0.2 -1.3 N.D. +0.5 +1.0
stress sodium fluoride 12.5 mM -0.5 +0.3 N.D. +0.4 +0.2
carbon source octanoate (C) +0.2 +0.2 N.D. +0.6 -0.4
stress Paraquat dichloride 0.016 mg/mL +0.3 +0.4 N.D. +0.2 -0.4
stress Carbenicillin 2 mg/ml +0.6 -0.1 N.D. -0.3 +0.4
stress Fusidic 0.0625 mg/ml +0.7 +0.3 N.D. +0.4 -0.3
carbon source L-Malic (C) +0.8 +0.4 N.D. +0.2 -0.0
stress Dimethyl Sulfoxide 5 vol% +0.6 +0.3 N.D. +0.4 +0.2
stress D-Cycloserine 0.1 mg/ml +1.0 +0.3 N.D. +0.4 +0.1
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