Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_82 and Pf1N1B4_83 are separated by 53 nucleotidesPf1N1B4_83 and Pf1N1B4_84 are separated by 250 nucleotidesPf1N1B4_84 and Pf1N1B4_85 are separated by 130 nucleotidesPf1N1B4_85 and Pf1N1B4_86 are separated by 29 nucleotides Pf1N1B4_82 - Mobile element protein, at 85,240 to 86,181 _82 Pf1N1B4_83 - putative lipoprotein, at 86,235 to 86,984 _83 Pf1N1B4_84 - Aldose 1-epimerase (EC 5.1.3.3), at 87,235 to 88,383 _84 Pf1N1B4_85 - Oxidoreductase, aldo/keto reductase family, at 88,514 to 89,335 _85 Pf1N1B4_86 - NTP pyrophosphohydrolases including oxidative damage repair enzymes, at 89,365 to 89,835 _86
Group Condition Pf1N1B4_82 Pf1N1B4_83 Pf1N1B4_84 Pf1N1B4_85 Pf1N1B4_86
carbon source carbon source Sucrose 1mM N.D. -0.1 -0.4 -0.9 N.D.
carbon source carbon source Sucrose 5mM N.D. -0.5 -0.0 -0.4 N.D.
anaerobic Nitrate reduction N.D. -0.5 -0.2 -0.2 N.D.
stress Cisplatin 0.006 mg/ml N.D. -0.1 -0.7 -0.1 N.D.
carbon source carbon source Sucrose 5mM N.D. -0.1 -0.6 -0.2 N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 N.D. -0.2 -0.4 -0.2 N.D.
nophagecontrol TIme6-nophage N.D. +0.0 -0.1 -0.7 N.D.
denitrifying Nitrate reduction, replicate C t3 N.D. -0.1 -0.4 -0.2 N.D.
lb LB N.D. -0.2 -0.5 +0.1 N.D.
carbon source carbon source Sucrose 1mM N.D. +0.2 -0.1 -0.6 N.D.
stress Choline chloride 200 mM N.D. -0.2 +0.2 -0.5 N.D.
lb LB N.D. -0.4 -0.2 +0.2 N.D.
phagefrs Time16-FRS N.D. +0.2 -0.2 -0.3 N.D.
nitrogen source L-Methionine (N) N.D. +0.2 +0.2 -0.7 N.D.
denitrifying Nitrate reduction, replicate A N.D. +0.2 -0.4 -0.0 N.D.
stress Spectinomycin 0.05 mg/ml N.D. +0.3 -0.2 -0.1 N.D.
temperature LB 37C N.D. -0.1 -0.3 +0.3 N.D.
carbon source carbon source Sucrose 20mM N.D. +0.3 -0.4 +0.1 N.D.
lb LB N.D. +0.4 -0.5 +0.2 N.D.
stress copper (II) chloride 2.5 mM N.D. +0.4 +0.2 -0.3 N.D.
stress Chlorite 1 mM N.D. +0.3 -0.2 +0.3 N.D.
nitrogen source Ammonium chloride (N) N.D. +0.2 -0.1 +0.4 N.D.
stress benzoic 0.58 mg/ml N.D. +0.4 -0.3 +0.4 N.D.
denitrifying Nitrate reduction, replicate B N.D. +0.2 -0.1 +0.5 N.D.
stress Tetracycline 0.0004 mg/ml N.D. +0.6 -0.1 +0.2 N.D.
stress Fusidic 0.0625 mg/ml N.D. +0.2 +0.2 +0.3 N.D.
carbon source D-Galactose (C) N.D. +0.3 +0.2 +0.2 N.D.
carbon source carbon source Sucrose 0.25mM N.D. +0.3 +0.2 +0.4 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A N.D. +0.1 +0.4 +0.5 N.D.
stress Doxycycline hyclate 0.0001 mg/ml N.D. +0.6 +0.2 +0.3 N.D.
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