Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_837 and Pf1N1B4_838 are separated by 101 nucleotidesPf1N1B4_838 and Pf1N1B4_839 are separated by 83 nucleotidesPf1N1B4_839 and Pf1N1B4_840 are separated by 98 nucleotidesPf1N1B4_840 and Pf1N1B4_841 are separated by 231 nucleotides Pf1N1B4_837 - Trehalose operon transcriptional repressor, at 960,712 to 961,416 _837 Pf1N1B4_838 - hypothetical protein, at 961,518 to 966,230 _838 Pf1N1B4_839 - GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2), at 966,314 to 967,891 _839 Pf1N1B4_840 - Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain, at 967,990 to 969,459 _840 Pf1N1B4_841 - ABC-type sugar transport systems, ATPase components, at 969,691 to 970,239 _841
Group Condition Pf1N1B4_837 Pf1N1B4_838 Pf1N1B4_839 Pf1N1B4_840 Pf1N1B4_841
carbon source carbon source Sucrose 0.25mM N.D. +0.0 N.D. N.D. -1.2
nitrogen source L-Methionine (N) N.D. -0.3 N.D. N.D. -0.8
carbon source pyruvate (C) N.D. +0.0 N.D. N.D. -1.0
carbon source Tween 20 (C) N.D. -0.0 N.D. N.D. -0.9
stress Sisomicin 0.001 mg/ml N.D. +0.1 N.D. N.D. -0.9
nitrogen source Ammonium chloride (N) N.D. +0.1 N.D. N.D. -0.9
carbon source a-Ketoglutaric (C) N.D. +0.0 N.D. N.D. -0.9
temperature LB 20C N.D. -0.1 N.D. N.D. -0.7
denitrifying Nitrate reduction, replicate A t1 N.D. -0.1 N.D. N.D. -0.7
nitrogen source Uridine (N) N.D. -0.2 N.D. N.D. -0.5
carbon source m-Inositol (C) N.D. -0.1 N.D. N.D. -0.6
anaerobic N2E2wt with N1B4m denitrifying repB N.D. -0.2 N.D. N.D. -0.5
carbon source D-Glucose (C) N.D. +0.1 N.D. N.D. -0.8
stress Thallium(I) acetate 0.008 mg/ml N.D. +0.0 N.D. N.D. -0.7
carbon source L-Leucine (C) N.D. -0.2 N.D. N.D. -0.5
stress Doxycycline hyclate 0.0001 mg/ml N.D. -0.2 N.D. N.D. -0.5
nitrogen source nitrogen source nitrate 20mM N.D. -0.0 N.D. N.D. -0.7
carbon source L-Glutamic (C) N.D. -0.0 N.D. N.D. -0.6
stress Cobalt chloride 0.3125 mM N.D. -0.2 N.D. N.D. -0.4
stress Rifampicin 0.004 mg/ml N.D. +0.2 N.D. N.D. -0.8
nitrogen source nitrogen source nitrate 5mM N.D. -0.1 N.D. N.D. -0.5
carbon source L-Malic (C) N.D. -0.1 N.D. N.D. -0.5
pH Minimal media pH9 N.D. +0.1 N.D. N.D. -0.6
stress Cephalothin 2.5 mg/ml N.D. +0.0 N.D. N.D. -0.6
stress Benzethonium chloride 0.0125 mM N.D. +0.1 N.D. N.D. -0.6
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 N.D. +0.0 N.D. N.D. -0.6
nitrogen source nitrogen source nitrite 0.1mM N.D. +0.1 N.D. N.D. -0.6
stress Thallium(I) acetate 0.008 mg/ml N.D. +0.2 N.D. N.D. -0.5
carbon source carbon source Sucrose 20mM N.D. +0.2 N.D. N.D. -0.4
carbon source carbon source Sucrose 5mM N.D. +0.2 N.D. N.D. +1.1
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