Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_818 and Pf1N1B4_819 are separated by 349 nucleotidesPf1N1B4_819 and Pf1N1B4_820 are separated by 331 nucleotidesPf1N1B4_820 and Pf1N1B4_821 are separated by 212 nucleotidesPf1N1B4_821 and Pf1N1B4_822 are separated by 759 nucleotides Pf1N1B4_818 - Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1), at 934,867 to 936,255 _818 Pf1N1B4_819 - Benzoate transport protein, at 936,605 to 937,810 _819 Pf1N1B4_820 - Glucose-selective porin OprB, at 938,142 to 939,479 _820 Pf1N1B4_821 - Glucose dehydrogenase, PQQ-dependent (EC 1.1.5.2), at 939,692 to 942,100 _821 Pf1N1B4_822 - ATP-dependent protease La (EC 3.4.21.53) Type I, at 942,860 to 945,277 _822
Group Condition Pf1N1B4_818 Pf1N1B4_819 Pf1N1B4_820 Pf1N1B4_821 Pf1N1B4_822
nitrogen source nitrogen source nitrate 20mM +0.1 -0.4 +0.0 -1.7 N.D.
nitrogen source nitrogen source nitrite 0.5mM -0.1 -0.1 +0.1 -1.8 N.D.
nitrogen source nitrogen source nitrite 0.5mM -0.1 -0.1 +0.2 -1.9 N.D.
nitrogen source L-Methionine (N) -0.2 -0.2 -0.4 -1.0 N.D.
nitrogen source nitrogen source nitrate 5mM -0.0 -0.3 +0.1 -1.4 N.D.
nitrogen source nitrogen source nitrate 20mM +0.1 -0.1 -0.0 -1.5 N.D.
nitrogen source nitrogen source nitrite 1mM +0.1 -0.1 +0.2 -1.7 N.D.
nitrogen source nitrogen source nitrite 1mM -0.0 -0.2 +0.1 -1.4 N.D.
carbon source L-Arabinose (C) +0.1 -0.1 -0.4 -1.0 N.D.
nitrogen source nitrogen source Ammonium chloride 20mM -0.0 -0.3 +0.1 -1.2 N.D.
carbon source L-Arabinose (C) -0.1 +0.2 -0.5 -1.0 N.D.
pH Minimal media pH9 -0.1 +0.1 -0.7 -0.6 N.D.
nitrogen source nitrogen source nitrite 0.1mM +0.2 -0.4 +0.0 -1.1 N.D.
nitrogen source nitrogen source nitrite 0.1mM -0.3 +0.1 +0.0 -1.0 N.D.
nitrogen source nitrogen source nitrate 5mM +0.1 +0.1 +0.2 -1.4 N.D.
carbon source carbon source Sucrose 0.25mM +0.1 -1.1 -0.2 +0.2 N.D.
carbon source carbon source Sucrose 5mM -0.1 -0.8 +0.0 -0.1 N.D.
stress Paraquat dichloride 0.016 mg/mL -0.4 +0.1 -0.1 -0.6 N.D.
carbon source D-Galactose (C) -0.1 -0.2 +0.2 -0.8 N.D.
nitrogen source nitrogen source Ammonium chloride 20mM +0.1 +0.1 +0.0 -0.9 N.D.
carbon source carbon source Sucrose 1mM -0.2 -0.2 +0.3 -0.4 N.D.
carbon source D-Galactose (C) -0.0 +0.1 +0.3 -0.8 N.D.
stress Sisomicin 0.001 mg/ml -0.4 -0.4 +0.1 +0.3 N.D.
carbon source carbon source Sucrose 1mM +0.3 -0.3 +0.2 -0.2 N.D.
carbon source L-Valine (C) -0.5 +0.0 +0.3 +0.3 N.D.
carbon source D-Ribose (C) -0.2 +0.1 +0.5 -0.3 N.D.
carbon source octanoate (C) -0.4 +0.0 +0.1 +0.6 N.D.
stress methylglyoxal 0.008 vol% +0.1 -0.2 +0.3 +0.5 N.D.
stress Fusidic 0.0625 mg/ml -0.1 -0.1 +0.4 +0.7 N.D.
stress Fusidic 0.125 mg/ml +0.0 +0.1 +0.4 +0.4 N.D.
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