Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_773 and Pf1N1B4_774 overlap by 4 nucleotidesPf1N1B4_774 and Pf1N1B4_775 are separated by 223 nucleotidesPf1N1B4_775 and Pf1N1B4_776 overlap by 4 nucleotidesPf1N1B4_776 and Pf1N1B4_777 overlap by 1 nucleotides Pf1N1B4_773 - ABC transporter for L-asparagine and L-glutamate, permease subunit 2 (from data), at 877,463 to 878,134 _773 Pf1N1B4_774 - ABC transporter for L-asparagine and L-glutamate, ATPase component (from data), at 878,131 to 878,865 _774 Pf1N1B4_775 - Signal transduction histidine kinase regulating C4-dicarboxylate transport system (EC 2.7.13.3), at 879,089 to 880,990 _775 Pf1N1B4_776 - Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake, at 880,987 to 882,315 _776 Pf1N1B4_777 - Membrane protein glpM, at 882,315 to 882,653 _777
Group Condition Pf1N1B4_773 Pf1N1B4_774 Pf1N1B4_775 Pf1N1B4_776 Pf1N1B4_777
carbon source L-Asparagine (C) -1.8 N.D. -1.6 -2.4 -0.1
carbon source L-Glutamic (C) -2.2 N.D. -1.6 -2.1 +0.0
carbon source carbon source Sucrose 1mM +0.6 N.D. -0.4 -0.3 -2.3
carbon source carbon source Sucrose 5mM +0.3 N.D. -0.1 -1.4 -1.1
denitrifying Nitrate reduction, replicate A t2 -0.3 N.D. -0.1 -0.3 -1.0
carbon source carbon source Sucrose 0.25mM +0.2 N.D. -0.2 +0.2 -1.7
carbon source carbon source Sucrose 0.25mM +0.9 N.D. -0.2 -0.3 -2.1
temperature LB 37C -0.6 N.D. -0.0 -0.4 -0.5
carbon source D-Trehalose (C) +0.4 N.D. -0.6 +0.1 -1.4
carbon source carbon source Sucrose 1mM +0.2 N.D. -0.1 +0.6 -2.2
nitrogen source nitrogen source nitrite 0.1mM +0.0 N.D. +0.0 -0.8 -0.8
pH Minimal media pH9 -1.0 N.D. -0.6 +0.0 +0.2
carbon source carbon source Sucrose 0.5mM +0.1 N.D. -0.0 +0.4 -1.8
anaerobic Nitrate reduction +0.2 N.D. +0.1 -0.2 -1.2
nitrogen source nitrogen source nitrite 0.5mM +0.1 N.D. +0.2 -0.5 -0.7
denitrifying Nitrate reduction, replicate A +0.3 N.D. -0.2 +0.2 -1.2
stress Benzethonium chloride 0.0125 mM -0.3 N.D. +0.3 -0.9 +0.3
anaerobic Nitrate reduction +0.2 N.D. +0.1 +0.2 -1.2
anaerobic Nitrate reduction +0.3 N.D. +0.1 -0.0 -0.9
nitrogen source nitrogen source nitrate 20mM +0.5 N.D. +0.1 +0.2 -1.3
carbon source carbon source Sucrose 20mM +0.1 N.D. +0.3 +0.2 -1.0
nitrogen source nitrogen source nitrite 1mM +0.5 N.D. -0.0 -0.1 -0.8
carbon source carbon source Sucrose 5mM +0.9 N.D. -0.1 +0.6 -1.8
nitrogen source nitrogen source nitrite 0.5mM +0.2 N.D. +0.1 +0.4 -1.0
nitrogen source nitrogen source nitrite 1mM +0.1 N.D. +0.2 +0.5 -0.9
nitrogen source nitrogen source nitrate 20mM +0.6 N.D. +0.2 +0.0 -0.7
nitrogen source nitrogen source Ammonium chloride 20mM +0.2 N.D. +0.3 +0.4 -0.5
carbon source carbon source Sucrose 20mM +0.6 N.D. +0.2 +0.8 -1.0
nitrogen source nitrogen source nitrate 5mM +0.6 N.D. +0.1 +0.9 -0.6
carbon source L-Glutamine (C) +1.0 N.D. +0.4 +0.4 -0.1
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