Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_764 and Pf1N1B4_765 are separated by 116 nucleotidesPf1N1B4_765 and Pf1N1B4_766 are separated by 413 nucleotidesPf1N1B4_766 and Pf1N1B4_767 are separated by 76 nucleotidesPf1N1B4_767 and Pf1N1B4_768 are separated by 83 nucleotides Pf1N1B4_764 - Uncharacterized isomerase yddE, PhzC-PhzF family, at 868,318 to 869,100 _764 Pf1N1B4_765 - Cys-tRNA(Pro) deacylase YbaK, at 869,217 to 869,687 _765 Pf1N1B4_766 - Glycerol uptake facilitator protein, at 870,101 to 870,910 _766 Pf1N1B4_767 - Glycerol kinase (EC 2.7.1.30), at 870,987 to 872,492 _767 Pf1N1B4_768 - Glycerol-3-phosphate regulon repressor, DeoR family, at 872,576 to 873,331 _768
Group Condition Pf1N1B4_764 Pf1N1B4_765 Pf1N1B4_766 Pf1N1B4_767 Pf1N1B4_768
pH Minimal media pH9 -0.6 -1.5 N.D. -2.4 N.D.
pH Minimal media pH9 -0.2 -0.4 N.D. -2.6 N.D.
carbon source Glycerol (C) -0.1 +0.0 N.D. -2.9 N.D.
carbon source L-Arabinose (C) -0.1 -0.7 N.D. -1.7 N.D.
nitrogen source nitrogen source nitrate 5mM -0.8 -1.0 N.D. -0.6 N.D.
carbon source carbon source Sucrose 5mM -0.9 -0.8 N.D. -0.4 N.D.
nitrogen source nitrogen source nitrite 0.1mM -1.0 +0.1 N.D. -1.1 N.D.
carbon source carbon source Sucrose 5mM +0.1 -1.1 N.D. -0.8 N.D.
nitrogen source nitrogen source Ammonium chloride 20mM -0.6 -0.5 N.D. -0.7 N.D.
stress Cisplatin 0.006 mg/ml -0.6 -1.0 N.D. -0.1 N.D.
stress 1-ethyl-3-methylimidazolium lysine 5 mM -0.3 -0.8 N.D. -0.7 N.D.
pH Minimal media pH6 +0.2 -0.3 N.D. -1.5 N.D.
temperature LB 37C -0.3 -0.8 N.D. -0.6 N.D.
phagefrs Time6-FRS -0.1 -0.9 N.D. -0.6 N.D.
carbon source L-Arabinose (C) +0.3 +0.0 N.D. -1.8 N.D.
anaerobic N2E2wt with N1B4m denitrifying repA +0.0 +0.7 N.D. -2.1 N.D.
nitrogen source L-Methionine (N) +0.4 -1.4 N.D. -0.4 N.D.
temperature LB 37C -1.0 +0.1 N.D. -0.5 N.D.
stress Carbenicillin 2 mg/ml -0.5 +0.5 N.D. -1.3 N.D.
pH Minimal media pH7 -0.2 +0.3 N.D. -1.5 N.D.
nitrogen source L-Valine (N) +0.3 -1.0 N.D. -0.4 N.D.
stress Rifampicin 0.004 mg/ml -0.9 -0.9 N.D. +0.8 N.D.
stress Nalidixic 0.004 mg/ml -0.4 +0.8 N.D. -1.0 N.D.
stress Cholin acetate 20 mM -0.3 +0.5 N.D. -0.8 N.D.
stress Doxycycline hyclate 0.0001 mg/ml -0.4 -1.1 N.D. +1.1 N.D.
stress Cholin acetate 10 mM -0.5 +0.7 N.D. -0.5 N.D.
stress nitrite 10 mM -0.6 +0.7 N.D. -0.4 N.D.
nitrogen source D-Glucosamine Hydrochloride (N) -0.7 +1.2 N.D. -0.1 N.D.
stress nitrate 100 mM -0.6 +0.6 N.D. +0.5 N.D.
denitrifying Nitrate reduction, replicate A t2 -0.2 +1.1 N.D. +0.6 N.D.
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