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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N1B4
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Pf1N1B4_761 and Pf1N1B4_762 are separated by 403 nucleotides
Pf1N1B4_762 and Pf1N1B4_763 overlap by 4 nucleotides
Pf1N1B4_763 and Pf1N1B4_764 are separated by 115 nucleotides
Pf1N1B4_764 and Pf1N1B4_765 are separated by 116 nucleotides
Pf1N1B4_761 - FIG00954879: hypothetical protein, at 865,479 to 865,769
_761
Pf1N1B4_762 - Ornithine carbamoyltransferase (EC 2.1.3.3), at 866,173 to 867,096
_762
Pf1N1B4_763 - Ferric iron ABC transporter, ATP-binding protein, at 867,093 to 868,202
_763
Pf1N1B4_764 - Uncharacterized isomerase yddE, PhzC-PhzF family, at 868,318 to 869,100
_764
Pf1N1B4_765 - Cys-tRNA(Pro) deacylase YbaK, at 869,217 to 869,687
_765
Group
Condition
Pf1N1B4
_761
Pf1N1B4
_762
Pf1N1B4
_763
Pf1N1B4
_764
Pf1N1B4
_765
pH
Minimal media pH9
-0.7
-2.7
-1.3
-0.6
-1.5
carbon source
carbon source Sucrose 5mM
+0.2
-3.1
-0.6
-0.9
-0.8
carbon source
carbon source Sucrose 5mM
-0.8
-3.1
-0.2
+0.1
-1.1
nitrogen source
nitrogen source nitrite 0.1mM
-0.6
-1.7
-1.8
-1.0
+0.1
nitrogen source
nitrogen source nitrate 5mM
-0.2
-3.0
+0.2
-0.8
-1.0
carbon source
carbon source Sucrose 1mM
-0.2
-3.0
-0.6
-0.7
-0.2
pH
Minimal media pH9
-0.6
-2.5
-1.0
-0.2
-0.4
stress
Chlorite 1 mM
-0.1
-1.8
-1.9
-0.1
-0.8
carbon source
carbon source Sucrose 0.25mM
-0.2
-2.2
-2.1
-0.4
+0.5
nitrogen source
nitrogen source Ammonium chloride 20mM
+0.2
-3.1
-0.1
-0.6
-0.5
stress
Rifampicin 0.004 mg/ml
+0.4
-0.4
-1.8
-0.9
-0.9
nitrogen source
L-Methionine (N)
+0.8
-2.0
-0.7
+0.4
-1.4
nitrogen source
nitrogen source nitrite 0.5mM
+0.6
-2.8
+0.6
+0.1
-1.0
nitrogen source
L-Isoleucine (N)
+1.0
-2.1
-0.3
-0.0
-1.0
carbon source
octanoate (C)
+0.9
-2.1
-0.2
-0.0
-0.9
carbon source
L-Isoleucine (C)
+1.0
-2.3
-0.2
+0.2
-0.7
carbon source
L-Alanine (C)
+0.9
-2.4
-0.6
-0.1
+0.2
carbon source
Putrescine (C)
+1.2
-2.3
-0.1
+0.3
-1.0
carbon source
L-Histidine (C)
+1.1
-2.6
-0.3
+0.2
-0.3
nitrogen source
L-Valine (N)
+1.3
-2.5
+0.1
+0.3
-1.0
carbon source
D-Alanine (C)
+1.0
-2.4
-0.1
+0.4
-0.5
carbon source
L-Malic (C)
+1.3
-2.3
-0.7
-0.1
+0.0
carbon source
a-Ketoglutaric (C)
+0.5
-2.9
+0.3
+0.3
+0.3
carbon source
L-Arabinose (C)
+0.5
-2.9
+0.6
+0.3
+0.0
nitrogen source
Carnitine Hydrochloride (N)
+1.1
-2.4
-0.1
+0.3
-0.3
carbon source
L-Glutamic (C)
+1.0
-1.9
-0.4
+0.5
-0.3
nitrogen source
D-Alanine (N)
+1.2
-2.5
+0.3
+0.3
-0.2
carbon source
D-Galacturonic Acid (C)
+1.6
-2.5
+0.3
+0.3
-0.6
carbon source
carbon source Sucrose 0.25mM
+0.8
-2.7
+1.1
+0.2
-0.3
carbon source
D-Ribose (C)
+0.5
-2.4
+0.6
+0.1
+0.5
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