Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_746 and Pf1N1B4_747 are separated by 325 nucleotidesPf1N1B4_747 and Pf1N1B4_748 are separated by 234 nucleotidesPf1N1B4_748 and Pf1N1B4_749 are separated by 2502 nucleotidesPf1N1B4_749 and Pf1N1B4_750 overlap by 4 nucleotides Pf1N1B4_746 - Alkyl hydroperoxide reductase subunit C-like protein, at 848,558 to 849,160 _746 Pf1N1B4_747 - Bacterioferritin-associated ferredoxin, at 849,486 to 849,704 _747 Pf1N1B4_748 - hypothetical protein, at 849,939 to 850,139 _748 Pf1N1B4_749 - hypothetical protein, at 852,642 to 852,824 _749 Pf1N1B4_750 - hypothetical protein, at 852,821 to 853,477 _750
Group Condition Pf1N1B4_746 Pf1N1B4_747 Pf1N1B4_748 Pf1N1B4_749 Pf1N1B4_750
carbon source L-Arabinose (C) N.D. +0.0 -0.6 -1.5 -0.4
temperature LB 37C N.D. -0.2 -1.8 +0.6 -1.0
carbon source Carnitine Hydrochloride (C) N.D. -0.2 -0.0 -0.9 -0.8
carbon source D,L-Lactate (C) N.D. -0.1 -0.4 -0.8 -0.4
pH Minimal media pH9 N.D. +0.0 +0.1 -1.3 -0.6
carbon source pyruvate (C) N.D. -0.1 -0.3 -1.2 +0.0
carbon source D-Galactose (C) N.D. +0.3 +0.1 -1.6 -0.2
lb LB N.D. -0.7 +0.1 -1.0 +0.2
carbon source carbon source Sucrose 1mM N.D. +0.4 -0.2 -1.6 +0.1
anaerobic Nitrate reduction N.D. +0.1 -0.9 +0.1 -0.5
phagefrs Time16-FRS N.D. +0.0 -0.4 -1.0 +0.2
nophagecontrol Time16-nophage N.D. +0.3 -0.4 -0.5 -0.3
stress Benzethonium chloride 0.0125 mM N.D. -0.6 -0.4 -0.3 +0.3
stress Fusidic 0.125 mg/ml N.D. -0.4 -0.7 -0.4 +0.6
carbon source carbon source Sucrose 5mM N.D. +0.1 +0.3 -1.4 +0.2
stress Paraquat dichloride 0.016 mg/mL N.D. -0.3 -0.9 +0.5 +0.3
carbon source carbon source Sucrose 0.25mM N.D. +0.3 -0.2 -0.7 +0.4
stress nitrate 100 mM N.D. -0.2 -0.2 +1.0 -0.8
denitrifying Nitrate reduction, replicate C N.D. +0.5 +0.3 -0.8 -0.1
nitrogen source nitrogen source nitrite 0.5mM N.D. +0.4 +0.1 -0.8 +0.3
carbon source carbon source Sucrose 1mM N.D. +0.4 +0.0 -0.8 +0.5
stress Carbenicillin 2 mg/ml N.D. -0.5 -0.2 +0.8 +0.1
carbon source L-Alanine (C) N.D. -0.2 +0.3 +0.8 -0.5
carbon source carbon source Sucrose 0.5mM N.D. +1.1 -0.2 -0.4 -0.1
carbon source L-Isoleucine (C) N.D. -0.2 -0.1 +1.0 -0.3
nitrogen source D-Glucosamine Hydrochloride (N) N.D. +0.3 -0.5 +0.9 +0.1
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 N.D. +0.5 -0.3 +0.9 -0.1
stress Thallium(I) acetate 0.008 mg/ml N.D. +0.5 +0.6 +0.2 -0.3
lb LB N.D. +0.3 +0.2 +1.0 -0.3
stress D-Cycloserine 0.1 mg/ml N.D. +0.2 +0.1 +1.2 +0.1
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