Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_720 and Pf1N1B4_721 are separated by 444 nucleotidesPf1N1B4_721 and Pf1N1B4_722 are separated by 4 nucleotidesPf1N1B4_722 and Pf1N1B4_723 are separated by 148 nucleotidesPf1N1B4_723 and Pf1N1B4_724 overlap by 11 nucleotides Pf1N1B4_720 - RND multidrug efflux transporter; Acriflavin resistance protein, at 821,270 to 824,296 _720 Pf1N1B4_721 - InaA protein, at 824,741 to 825,454 _721 Pf1N1B4_722 - SAM-dependent methyltransferases, at 825,459 to 826,127 _722 Pf1N1B4_723 - two-component system sensor protein, at 826,276 to 827,556 _723 Pf1N1B4_724 - DNA-binding response regulator ColR, at 827,546 to 828,229 _724
Group Condition Pf1N1B4_720 Pf1N1B4_721 Pf1N1B4_722 Pf1N1B4_723 Pf1N1B4_724
stress Aluminum chloride 2.5 mM -0.1 +0.4 -1.1 -2.7 -2.4
stress Cisplatin 0.006 mg/ml -0.1 -0.3 -1.8 +0.6 -1.3
carbon source D-Alanine (C) -0.1 +0.0 -1.5 +0.0 -0.7
lb LB -0.1 +0.2 -2.1 +0.1 -0.3
carbon source carbon source Sucrose 1mM +0.0 +0.3 -0.9 -0.2 -1.4
anaerobic N2E2wt with N1B4m denitrifying repB +0.1 +0.4 -2.0 -0.2 -0.3
nitrogen source L-Methionine (N) -0.0 -0.3 -1.2 +0.2 -0.7
carbon source Fumarate (C) +0.1 -0.3 -1.2 -0.3 -0.4
stress Fusidic 0.125 mg/ml -0.3 -0.0 -1.9 +0.3 -0.0
carbon source octanoate (C) +0.0 -0.9 -0.5 -2.7 +2.2
carbon source D-Lactate (C) +0.1 -0.0 -2.0 +0.2 -0.1
lb LB +0.0 +0.2 -2.0 +0.2 -0.2
nitrogen source nitrogen source nitrite 0.1mM +0.2 +0.2 -0.4 -1.2 -0.4
nitrogen source nitrogen source Ammonium chloride 20mM +0.1 +0.3 -0.8 -0.2 -0.9
carbon source D-Fructose (C) -0.1 -0.1 -0.8 +0.7 -1.0
carbon source L-Arabinose (C) -0.0 +0.0 +0.6 -0.7 -1.1
stress Chloride 200 mM -0.2 +0.2 -1.5 +0.4 -0.1
temperature LB 37C -0.2 +0.2 -1.2 +0.6 -0.6
temperature LB 30C -0.1 +0.2 -0.9 +0.4 -0.7
stress Rifampicin 0.004 mg/ml +0.3 -0.7 +0.4 -1.2 +0.3
stress 1-ethyl-3-methylimidazolium lysine 5 mM -0.1 +0.0 +0.2 +0.8 -1.8
stress Doxycycline hyclate 0.0001 mg/ml -0.2 -0.3 +0.7 -2.0 +1.4
stress nitrate 100 mM -0.0 +0.2 -1.3 +1.6 -0.9
stress Choline Lysine 6 mM -0.1 +0.3 -1.2 +1.2 -0.6
nitrogen source nitrogen source nitrate 20mM +0.2 +0.1 -0.7 +0.7 -0.7
temperature LB 37C +0.2 +0.5 -1.4 +0.7 -0.2
stress Choline chloride 200 mM -0.2 +0.3 -0.1 +1.0 -0.8
pH Minimal media pH9 +0.0 +0.3 +1.2 +1.4 -1.6
stress Benzethonium chloride 0.0125 mM -0.1 +0.3 +0.9 -0.0 +1.2
denitrifying Nitrate reduction, replicate C t2 +0.0 +0.4 +0.6 +0.3 +0.9
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