Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_682 and Pf1N1B4_683 are separated by 42 nucleotidesPf1N1B4_683 and Pf1N1B4_684 are separated by 197 nucleotidesPf1N1B4_684 and Pf1N1B4_685 overlap by 1 nucleotidesPf1N1B4_685 and Pf1N1B4_686 are separated by 292 nucleotides Pf1N1B4_682 - hypothetical protein, at 779,547 to 779,699 _682 Pf1N1B4_683 - Fumarate hydratase class I, aerobic (EC 4.2.1.2), at 779,742 to 781,265 _683 Pf1N1B4_684 - C4-dicarboxylate transport sensor protein, at 781,463 to 783,265 _684 Pf1N1B4_685 - Nitrogen regulation protein NR(I), at 783,265 to 784,599 _685 Pf1N1B4_686 - Dicarboxylate MFS transporter, at 784,892 to 786,211 _686
Group Condition Pf1N1B4_682 Pf1N1B4_683 Pf1N1B4_684 Pf1N1B4_685 Pf1N1B4_686
carbon source a-Ketoglutaric (C) N.D. -1.3 -2.9 N.D. -2.7
carbon source a-Ketoglutaric (C) N.D. -1.0 -2.7 N.D. -2.9
nitrogen source L-Serine (N) N.D. -3.0 -0.2 N.D. -0.0
carbon source Putrescine (C) N.D. -2.6 -0.4 N.D. +0.1
carbon source L-Asparagine (C) N.D. -2.6 -0.2 N.D. -0.0
phagefrs Time16-FRS N.D. -2.1 -0.2 N.D. +0.0
carbon source L-Glutamine (C) N.D. -2.5 +0.0 N.D. +0.2
carbon source L-Arginine (C) N.D. -2.2 -0.1 N.D. +0.1
carbon source L-Histidine (C) N.D. -2.3 -0.0 N.D. +0.2
carbon source L-Glutamic (C) N.D. -2.4 -0.0 N.D. +0.3
nitrogen source nitrogen source nitrate 20mM N.D. -1.7 -0.3 N.D. -0.1
nophagecontrol TIme6-nophage N.D. -1.6 -0.4 N.D. -0.1
stress Spectinomycin 0.05 mg/ml N.D. -1.4 -0.2 N.D. -0.4
stress 5-Hydroxymethylfurfural 2.5 mM N.D. -1.5 -0.0 N.D. -0.4
temperature LB 20C N.D. -1.7 -0.2 N.D. +0.1
stress copper (II) chloride 2.5 mM N.D. -1.5 -0.1 N.D. -0.2
carbon source D-Galacturonic Acid (C) N.D. -1.7 -0.0 N.D. -0.0
carbon source L-Citrulline (C) N.D. -2.0 -0.0 N.D. +0.2
stress copper (II) chloride 2.5 mM N.D. -1.3 -0.6 N.D. +0.1
stress nitrite 10 mM N.D. -2.0 +0.2 N.D. +0.2
carbon source casaminos (C) N.D. -1.8 -0.0 N.D. +0.2
temperature LB 10C N.D. -1.6 +0.1 N.D. -0.1
stress benzoic 0.58 mg/ml N.D. -1.8 +0.3 N.D. -0.0
stress Cephalothin 2.5 mg/ml N.D. -1.7 -0.1 N.D. +0.3
stress Spectinomycin 0.025 mg/ml N.D. -1.7 +0.2 N.D. +0.0
stress nitrite 10 mM N.D. -1.8 +0.3 N.D. +0.1
stress Tetracycline 0.0004 mg/ml N.D. -1.5 +0.3 N.D. +0.1
stress Choline chloride 200 mM N.D. +1.5 -0.3 N.D. -0.2
pH Minimal media pH9 N.D. +1.8 +0.0 N.D. +0.0
pH Minimal media pH9 N.D. +1.7 +0.7 N.D. -0.1
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