Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_60 and Pf1N1B4_61 are separated by 276 nucleotidesPf1N1B4_61 and Pf1N1B4_62 are separated by 71 nucleotidesPf1N1B4_62 and Pf1N1B4_63 are separated by 200 nucleotidesPf1N1B4_63 and Pf1N1B4_64 are separated by 109 nucleotides Pf1N1B4_60 - Serine phosphatase RsbU, regulator of sigma subunit, at 64,018 to 65,199 _60 Pf1N1B4_61 - FIG00953170: hypothetical protein, at 65,476 to 65,775 _61 Pf1N1B4_62 - VacJ-like lipoprotein precursor, at 65,847 to 66,536 _62 Pf1N1B4_63 - Phosphonoacetaldehyde phosphonohydrolase-related protein, at 66,737 to 67,357 _63 Pf1N1B4_64 - Chromosome segregation ATPases, at 67,467 to 67,730 _64
Group Condition Pf1N1B4_60 Pf1N1B4_61 Pf1N1B4_62 Pf1N1B4_63 Pf1N1B4_64
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 N.D. N.D. N.D. -2.3 N.D.
carbon source octanoate (C) N.D. N.D. N.D. -1.5 N.D.
nitrogen source nitrogen source nitrite 0.1mM N.D. N.D. N.D. -1.5 N.D.
carbon source D-Fructose (C) N.D. N.D. N.D. -1.2 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A N.D. N.D. N.D. -1.1 N.D.
nitrogen source Ammonium chloride (N) N.D. N.D. N.D. -1.0 N.D.
phagefrs Time6-FRS N.D. N.D. N.D. -1.0 N.D.
stress nitrite 10 mM N.D. N.D. N.D. -0.9 N.D.
nitrogen source nitrogen source nitrite 0.1mM N.D. N.D. N.D. -0.9 N.D.
stress Cisplatin 0.006 mg/ml N.D. N.D. N.D. -0.9 N.D.
nitrogen source nitrate (N) N.D. N.D. N.D. -0.9 N.D.
nitrogen source Cytidine (N) N.D. N.D. N.D. -0.9 N.D.
stress Cobalt chloride 0.3125 mM N.D. N.D. N.D. -0.9 N.D.
carbon source Uridine (C) N.D. N.D. N.D. -0.9 N.D.
nitrogen source Cytosine (N) N.D. N.D. N.D. -0.8 N.D.
temperature LB 37C N.D. N.D. N.D. -0.8 N.D.
carbon source L-Histidine (C) N.D. N.D. N.D. -0.8 N.D.
nitrogen source nitrogen source nitrite 1mM N.D. N.D. N.D. -0.8 N.D.
carbon source m-Inositol (C) N.D. N.D. N.D. -0.7 N.D.
nitrogen source nitrogen source Ammonium chloride 20mM N.D. N.D. N.D. -0.7 N.D.
carbon source L-Arginine (C) N.D. N.D. N.D. -0.7 N.D.
stress acetate 20 mM N.D. N.D. N.D. -0.7 N.D.
carbon source L-Arabinose (C) N.D. N.D. N.D. -0.7 N.D.
stress Dimethyl Sulfoxide 5 vol% N.D. N.D. N.D. -0.7 N.D.
pH Minimal media pH9 N.D. N.D. N.D. +0.7 N.D.
temperature LB 20C N.D. N.D. N.D. +0.7 N.D.
stress Paraquat dichloride 0.016 mg/mL N.D. N.D. N.D. +0.7 N.D.
stress Benzethonium chloride 0.0125 mM N.D. N.D. N.D. +0.8 N.D.
pH Minimal media pH8 N.D. N.D. N.D. +0.8 N.D.
anaerobic N2E2wt with N1B4m denitrifying repB N.D. N.D. N.D. +1.3 N.D.
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