Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_592 and Pf1N1B4_593 are separated by 222 nucleotidesPf1N1B4_593 and Pf1N1B4_594 are separated by 3 nucleotidesPf1N1B4_594 and Pf1N1B4_595 overlap by 8 nucleotidesPf1N1B4_595 and Pf1N1B4_596 are separated by 150 nucleotides Pf1N1B4_592 - Glucose-selective porin OprB, at 682,990 to 684,336 _592 Pf1N1B4_593 - Glucose ABC transporter, ATP-binding subunit (EC 3.6.3.-), at 684,559 to 685,719 _593 Pf1N1B4_594 - Glucose ABC transport system, inner membrane component 2, at 685,723 to 686,568 _594 Pf1N1B4_595 - Glucose ABC transport system, inner membrane component 1, at 686,561 to 687,505 _595 Pf1N1B4_596 - Glucose ABC transport system, periplasmic sugar-binding protein, at 687,656 to 688,963 _596
Group Condition Pf1N1B4_592 Pf1N1B4_593 Pf1N1B4_594 Pf1N1B4_595 Pf1N1B4_596
pH Minimal media pH9 +0.3 -2.9 -2.8 -2.9 -4.0
pH Minimal media pH9 +0.2 -2.7 -2.9 -2.5 -3.3
pH Minimal media pH6 +0.1 -2.8 -2.6 -3.1 -2.6
carbon source D-Mannose (C) +0.6 -2.2 -1.9 -1.8 -2.3
carbon source D-Glucose (C) -0.3 -1.5 -1.3 -2.0 -1.6
nitrogen source L-Serine (N) -0.2 -1.2 -1.7 -1.3 -1.6
nitrogen source L-Arginine (N) +0.1 -1.7 -1.6 -1.6 -0.9
carbon source D-Glucose (C) +0.1 -1.6 -1.2 -1.7 -1.2
nitrogen source nitrogen source Ammonium chloride 20mM +0.2 -1.5 -1.3 -1.0 -1.5
carbon source D-Galactose (C) +0.1 -1.4 -1.3 -1.5 -0.7
carbon source D-Galactose (C) +0.4 -1.4 -1.2 -1.2 -1.1
nitrogen source nitrogen source Ammonium chloride 20mM -0.0 -1.0 -1.0 -1.2 -0.8
nitrogen source L-Histidine (N) +0.0 -1.0 -0.9 -0.9 -0.5
nitrogen source nitrogen source nitrate 20mM -0.0 -1.5 -0.5 -0.9 +0.2
nitrogen source L-Isoleucine (N) -0.0 -0.8 -0.2 -0.2 -1.1
nitrogen source L-Lysine (N) -0.2 -0.5 -0.6 -0.4 -0.3
nitrogen source nitrogen source nitrate 20mM -0.4 +0.3 -0.7 -0.3 -0.4
pH Minimal media pH8 +0.2 -0.4 -0.5 -0.5 -0.2
nitrogen source nitrogen source nitrite 0.1mM +0.1 -0.3 -0.8 -0.5 +0.3
denitrifying Nitrate reduction, replicate B +0.2 -0.4 -0.1 -0.1 -0.8
carbon source D-Fructose (C) -0.3 -0.6 -0.4 -0.3 +0.4
carbon source carbon source Sucrose 1mM +0.1 -1.1 -0.2 -0.1 +0.3
denitrifying Nitrate reduction, replicate B t2 -0.0 -0.1 -0.6 +0.1 +0.7
carbon source carbon source Sucrose 0.25mM -0.2 +0.4 -0.2 -0.2 +0.6
stress Dimethyl Sulfoxide 5 vol% +0.1 -0.3 +0.4 +0.2 +0.5
carbon source carbon source Sucrose 1mM +0.3 +0.5 +0.1 -0.3 +0.5
carbon source carbon source Sucrose 0.25mM +0.5 +0.4 +0.3 -0.2 +0.9
carbon source Putrescine (C) +0.0 +0.2 +0.6 +0.6 +0.7
carbon source casaminos (C) -0.0 +0.3 +0.6 +0.7 +0.7
nitrogen source D-Alanine (N) -0.0 +0.3 +0.7 +0.8 +0.5
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