Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_5904 and Pf1N1B4_5905 are separated by 24 nucleotidesPf1N1B4_5905 and Pf1N1B4_5906 are separated by 162 nucleotidesPf1N1B4_5906 and Pf1N1B4_5907 are separated by 63 nucleotidesPf1N1B4_5907 and Pf1N1B4_5908 are separated by 89 nucleotides Pf1N1B4_5904 - FIG00955320: hypothetical protein, at 346,828 to 347,736 _5904 Pf1N1B4_5905 - Transcriptional regulator, LysR family, at 347,761 to 348,666 _5905 Pf1N1B4_5906 - Esterase/lipase, at 348,829 to 349,845 _5906 Pf1N1B4_5907 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 349,909 to 351,336 _5907 Pf1N1B4_5908 - Nicotinamidase family protein YcaC, at 351,426 to 352,052 _5908
Group Condition Pf1N1B4_5904 Pf1N1B4_5905 Pf1N1B4_5906 Pf1N1B4_5907 Pf1N1B4_5908
carbon source octanoate (C) -2.1 -0.2 -1.8 +0.3 N.D.
anaerobic N2E2wt with N1B4m denitrifying repB +0.1 -0.4 -2.0 -1.0 N.D.
carbon source D-Trehalose (C) -2.0 -0.5 -0.8 +0.2 N.D.
carbon source Putrescine (C) -1.0 +0.0 -1.6 +0.0 N.D.
nitrogen source Adenine (N) -0.9 -0.4 -0.7 -0.4 N.D.
nitrogen source Uridine (N) -0.9 +0.2 -1.4 -0.3 N.D.
carbon source Carnitine Hydrochloride (C) -0.9 -0.3 -1.7 +0.4 N.D.
nitrogen source L-Methionine (N) -1.1 -0.3 -1.0 +0.0 N.D.
carbon source L-Glutamine (C) -1.4 +0.2 -1.3 +0.2 N.D.
nitrogen source L-Isoleucine (N) -0.5 -0.2 -1.4 -0.1 N.D.
nitrogen source nitrogen source nitrite 0.1mM -2.0 -0.3 +0.1 -0.1 N.D.
nitrogen source nitrogen source nitrite 0.1mM -1.9 -0.2 -0.4 +0.3 N.D.
carbon source D-Alanine (C) -1.5 -0.1 -0.4 -0.1 N.D.
stress D-Cycloserine 0.1 mg/ml -0.3 +0.1 -1.6 +0.1 N.D.
anaerobic Nitrate reduction -1.7 -0.2 -0.1 +0.2 N.D.
lb LB -0.5 +0.2 -1.5 +0.2 N.D.
carbon source carbon source Sucrose 1mM -1.6 +0.6 -0.7 +0.0 N.D.
carbon source L-Leucine (C) -0.4 -0.3 -1.3 +0.6 N.D.
stress Cisplatin 0.006 mg/ml +0.4 -0.4 -0.8 -0.5 N.D.
nitrogen source Thymine (N) -1.5 +0.4 -0.2 +0.0 N.D.
nitrogen source nitrogen source nitrite 1mM -1.4 -0.0 +0.3 +0.2 N.D.
pH Minimal media pH9 -1.3 -0.1 -0.2 +0.8 N.D.
denitrifying Nitrate reduction, replicate C +0.8 -0.3 -0.9 -0.5 N.D.
stress acetate 20 mM -0.9 -0.1 +0.7 -0.6 N.D.
carbon source Fumarate (C) -1.3 -0.1 +0.1 +0.5 N.D.
nitrogen source nitrogen source nitrate 20mM +0.6 +0.2 -1.2 -0.4 N.D.
anaerobic N2E2wt with N1B4m denitrifying repA +0.5 -0.6 -0.7 +0.3 N.D.
carbon source D-Ribose (C) -0.2 +0.3 -1.0 +0.5 N.D.
carbon source L-Lactate (C) -1.0 -0.0 +0.4 +0.6 N.D.
temperature LB 37C +0.8 +0.8 +0.7 +1.1 N.D.
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