Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_5901 and Pf1N1B4_5902 are separated by 305 nucleotidesPf1N1B4_5902 and Pf1N1B4_5903 are separated by 2 nucleotidesPf1N1B4_5903 and Pf1N1B4_5904 overlap by 12 nucleotidesPf1N1B4_5904 and Pf1N1B4_5905 are separated by 24 nucleotides Pf1N1B4_5901 - hypothetical protein, at 345,393 to 346,082 _5901 Pf1N1B4_5902 - FIG022160: hypothetical toxin, at 346,388 to 346,528 _5902 Pf1N1B4_5903 - FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin), at 346,531 to 346,839 _5903 Pf1N1B4_5904 - FIG00955320: hypothetical protein, at 346,828 to 347,736 _5904 Pf1N1B4_5905 - Transcriptional regulator, LysR family, at 347,761 to 348,666 _5905
Group Condition Pf1N1B4_5901 Pf1N1B4_5902 Pf1N1B4_5903 Pf1N1B4_5904 Pf1N1B4_5905
carbon source octanoate (C) -0.2 N.D. N.D. -2.1 -0.2
carbon source D-Trehalose (C) +0.3 N.D. N.D. -2.0 -0.5
nitrogen source nitrogen source nitrite 0.1mM +0.1 N.D. N.D. -1.9 -0.2
anaerobic Nitrate reduction +0.2 N.D. N.D. -1.7 -0.2
nitrogen source nitrogen source nitrite 0.1mM +0.5 N.D. N.D. -2.0 -0.3
denitrifying Nitrate reduction, replicate B t2 -0.2 N.D. N.D. -1.0 -0.3
carbon source D-Alanine (C) +0.1 N.D. N.D. -1.5 -0.1
nitrogen source nitrogen source nitrite 1mM +0.0 N.D. N.D. -1.4 -0.0
carbon source Fumarate (C) +0.0 N.D. N.D. -1.3 -0.1
carbon source Carnitine Hydrochloride (C) -0.2 N.D. N.D. -0.9 -0.3
pH Minimal media pH9 +0.1 N.D. N.D. -1.3 -0.1
phagefrs Time6-FRS +0.1 N.D. N.D. -1.2 -0.3
denitrifying Nitrate reduction, replicate B t1 -0.3 N.D. N.D. -1.0 -0.1
nitrogen source L-Methionine (N) +0.1 N.D. N.D. -1.1 -0.3
nitrogen source Thymine (N) -0.0 N.D. N.D. -1.5 +0.4
nitrogen source Adenine (N) +0.2 N.D. N.D. -0.9 -0.4
nitrogen source Cytosine (N) -0.4 N.D. N.D. -1.0 +0.3
carbon source L-Asparagine (C) -0.1 N.D. N.D. -1.1 +0.2
carbon source L-Glutamine (C) +0.4 N.D. N.D. -1.4 +0.2
carbon source carbon source Sucrose 1mM +0.3 N.D. N.D. -1.6 +0.6
carbon source carbon source Sucrose 0.25mM +0.5 N.D. N.D. -1.2 +0.1
nitrogen source nitrate (N) -0.1 N.D. N.D. -1.0 +0.4
nitrogen source Ammonium chloride (N) +0.0 N.D. N.D. -0.9 +0.3
carbon source carbon source Sucrose 5mM +0.5 N.D. N.D. -0.5 -0.3
stress Carbenicillin 2 mg/ml -0.1 N.D. N.D. -0.7 +0.5
nitrogen source Cytidine (N) +0.4 N.D. N.D. -0.6 +0.9
stress Doxycycline hyclate 0.0001 mg/ml +0.6 N.D. N.D. +0.7 +0.1
carbon source carbon source Sucrose 1mM +0.5 N.D. N.D. +0.5 +0.5
nophagecontrol TIme6-nophage +0.2 N.D. N.D. +1.2 +0.1
temperature LB 37C +0.2 N.D. N.D. +0.8 +0.8
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