Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 191 experiments or choose conditions or try the comparative fitness browser

500 ntPf1N1B4_5858 and Pf1N1B4_5859 are separated by 229 nucleotidesPf1N1B4_5859 and Pf1N1B4_5860 are separated by 213 nucleotidesPf1N1B4_5860 and Pf1N1B4_5861 are separated by 555 nucleotidesPf1N1B4_5861 and Pf1N1B4_5862 are separated by 52 nucleotides Pf1N1B4_5858 - carboxyphosphonoenolpyruvate phosphonomutase, putative, at 291,317 to 292,186 _5858 Pf1N1B4_5859 - Glutamate carboxypeptidase (EC 3.4.17.11), at 292,416 to 293,657 _5859 Pf1N1B4_5860 - Two-component response regulator, at 293,871 to 294,806 _5860 Pf1N1B4_5861 - Alpha/beta hydrolase fold (EC 3.8.1.5), at 295,362 to 296,288 _5861 Pf1N1B4_5862 - Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD, at 296,341 to 297,840 _5862
Group Condition Pf1N1B4_5858 Pf1N1B4_5859 Pf1N1B4_5860 Pf1N1B4_5861 Pf1N1B4_5862
carbon source carbon source Sucrose 0.25mM +0.0 -0.1 -3.5 -0.4 -0.2
temperature LB 37C -0.4 -2.2 +0.5 -0.5 -0.1
temperature LB 37C -0.7 -0.7 -0.4 +0.4 -1.1
anaerobic N2E2wt with N1B4m denitrifying repA -2.1 +0.3 -0.2 -0.1 -0.1
anaerobic Nitrate reduction -0.4 -0.6 -0.8 +0.3 -0.2
nitrogen source L-Methionine (N) -0.3 -0.9 -1.0 -0.0 +0.5
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A -1.2 -0.3 +0.0 -0.4 +0.4
nitrogen source D-Glucosamine Hydrochloride (N) +0.5 -0.4 -0.7 -0.3 -0.5
carbon source L-Lactate (C) -0.7 -0.5 +0.6 -0.4 -0.1
carbon source L-Alanine (C) +0.3 +0.5 -1.4 -0.1 -0.1
stress Bacitracin 2 mg/ml +0.1 -0.0 -1.3 +0.7 +0.0
stress 1-ethyl-3-methylimidazolium lysine 5 mM +0.4 -1.2 +0.1 -0.1 +0.3
stress copper (II) chloride 2.5 mM -0.2 -1.1 +0.7 +0.2 -0.1
carbon source Cytidine (C) +0.2 +0.4 -1.4 +0.2 +0.3
carbon source Putrescine (C) +0.6 -0.1 -1.4 +0.4 +0.0
nitrogen source Putrescine (N) +0.6 +0.3 -1.2 +0.1 -0.1
stress Doxycycline hyclate 0.0001 mg/ml +0.5 +0.6 -0.9 -0.2 +0.1
denitrifying Nitrate reduction, replicate C t2 -0.2 -0.3 +1.0 +0.5 -0.6
lb LB -0.4 +0.3 +1.1 -0.3 -0.3
nitrogen source Thymine (N) -0.2 +0.8 -0.7 +0.4 +0.2
carbon source casaminos (C) +0.5 +0.3 -0.9 +0.3 +0.6
pH Minimal media pH9 -0.4 +0.3 +0.3 +0.9 -0.4
carbon source carbon source Sucrose 5mM +0.5 +0.2 +0.9 -0.7 +0.0
nitrogen source L-Leucine (N) +0.7 +0.7 -0.3 -0.5 +0.2
lb LB +0.4 +0.7 -0.6 -0.1 +0.6
carbon source carbon source Sucrose 0.25mM +0.8 -0.2 +1.0 -0.4 -0.2
stress Fusidic 0.125 mg/ml +0.5 -0.3 +0.3 +0.5 +0.6
carbon source carbon source Sucrose 1mM +0.3 -0.0 +1.2 +0.6 -0.3
stress Aluminum chloride 2.5 mM +0.8 +0.8 -0.7 +0.2 +0.7
nitrogen source Cytosine (N) +0.1 +0.8 -0.3 +1.0 +0.3
remove
Pf1N1B4_5858
plot
remove
Pf1N1B4_5859
plot
remove
Pf1N1B4_5860
remove
Pf1N1B4_5861
plot
remove
Pf1N1B4_5862
plot