Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_5842 and Pf1N1B4_5843 are separated by 11 nucleotidesPf1N1B4_5843 and Pf1N1B4_5844 are separated by 164 nucleotidesPf1N1B4_5844 and Pf1N1B4_5845 are separated by 322 nucleotidesPf1N1B4_5845 and Pf1N1B4_5846 are separated by 117 nucleotides Pf1N1B4_5842 - Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase), at 277,098 to 277,685 _5842 Pf1N1B4_5843 - phospholipase/carboxylesterase family protein, at 277,697 to 278,413 _5843 Pf1N1B4_5844 - Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein, at 278,578 to 279,357 _5844 Pf1N1B4_5845 - GMP synthase - Glutamine amidotransferase domain, at 279,680 to 280,321 _5845 Pf1N1B4_5846 - Rhodanese-related sulfurtransferase, at 280,439 to 280,873 _5846
Group Condition Pf1N1B4_5842 Pf1N1B4_5843 Pf1N1B4_5844 Pf1N1B4_5845 Pf1N1B4_5846
temperature LB 37C N.D. -1.4 -1.0 N.D. N.D.
temperature LB 37C N.D. -1.0 -0.7 N.D. N.D.
stress Paraquat dichloride 0.016 mg/mL N.D. -0.8 -0.6 N.D. N.D.
carbon source carbon source Sucrose 0.5mM N.D. -0.6 -0.4 N.D. N.D.
carbon source carbon source Sucrose 1mM N.D. -1.3 +0.4 N.D. N.D.
stress Aluminum chloride 2.5 mM N.D. -0.9 -0.0 N.D. N.D.
stress Nalidixic 0.004 mg/ml N.D. -0.8 -0.1 N.D. N.D.
stress Cisplatin 0.006 mg/ml N.D. -0.6 -0.2 N.D. N.D.
nophagecontrol TIme6-nophage N.D. -0.5 -0.2 N.D. N.D.
carbon source carbon source Sucrose 5mM N.D. -0.8 +0.1 N.D. N.D.
lb LB N.D. +0.3 -0.7 N.D. N.D.
nitrogen source Cytidine (N) N.D. +0.3 -0.5 N.D. N.D.
carbon source L-Alanine (C) N.D. +0.4 -0.6 N.D. N.D.
carbon source D-Lactate (C) N.D. +0.5 -0.6 N.D. N.D.
carbon source L-Glutamine (C) N.D. +0.3 -0.4 N.D. N.D.
anaerobic Nitrate reduction N.D. -0.5 +0.4 N.D. N.D.
carbon source D-Galactose (C) N.D. +0.4 -0.4 N.D. N.D.
stress 1-ethyl-3-methylimidazolium lysine 5 mM N.D. -0.4 +0.5 N.D. N.D.
denitrifying Nitrate reduction, replicate C t2 N.D. +0.6 -0.5 N.D. N.D.
pH Minimal media pH9 N.D. -0.3 +0.7 N.D. N.D.
denitrifying Nitrate reduction, replicate A N.D. +0.8 -0.3 N.D. N.D.
carbon source D-Galactose (C) N.D. +0.7 -0.2 N.D. N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 N.D. +0.8 -0.2 N.D. N.D.
denitrifying Nitrate reduction, replicate B t2 N.D. +0.8 -0.1 N.D. N.D.
stress sodium fluoride 12.5 mM N.D. +0.8 -0.0 N.D. N.D.
denitrifying Nitrate reduction, replicate C t1 N.D. +0.9 -0.1 N.D. N.D.
carbon source L-Arabinose (C) N.D. +0.7 +0.1 N.D. N.D.
carbon source Fumarate (C) N.D. +0.8 +0.1 N.D. N.D.
pH Minimal media pH9 N.D. +0.7 +0.3 N.D. N.D.
anaerobic N2E2wt with N1B4m denitrifying repA N.D. +0.1 +1.1 N.D. N.D.
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