Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_576 and Pf1N1B4_577 are separated by 123 nucleotidesPf1N1B4_577 and Pf1N1B4_578 are separated by 45 nucleotidesPf1N1B4_578 and Pf1N1B4_579 are separated by 83 nucleotidesPf1N1B4_579 and Pf1N1B4_580 are separated by 11 nucleotides Pf1N1B4_576 - hypothetical protein, at 669,695 to 669,835 _576 Pf1N1B4_577 - Lysophospholipase (EC 3.1.1.5); Monoglyceride lipase (EC 3.1.1.23); putative, at 669,959 to 670,903 _577 Pf1N1B4_578 - enoyl-CoA hydratase, R-specific, at 670,949 to 671,419 _578 Pf1N1B4_579 - Membrane fusion component of tripartite multidrug resistance system, at 671,503 to 672,363 _579 Pf1N1B4_580 - FIG00953813: hypothetical protein, at 672,375 to 672,581 _580
Group Condition Pf1N1B4_576 Pf1N1B4_577 Pf1N1B4_578 Pf1N1B4_579 Pf1N1B4_580
carbon source octanoate (C) +0.4 -0.3 -1.1 -1.5 -2.0
stress Carbenicillin 2 mg/ml -0.4 +0.1 -2.7 -0.3 -0.2
carbon source L-Asparagine (C) -0.8 -0.3 -2.2 +0.1 -0.3
nitrogen source L-Citrulline (N) +0.0 -0.1 -3.1 +0.1 -0.1
nitrogen source nitrogen source Ammonium chloride 20mM -0.2 +0.1 -2.5 -0.2 -0.2
nitrogen source L-Arginine (N) -0.3 -0.0 -2.5 -0.1 +0.0
pH Minimal media pH6 +0.2 -0.2 -2.5 -0.3 +0.0
stress 5-Hydroxymethylfurfural 2.5 mM -1.1 -0.3 -0.5 -0.6 -0.3
carbon source D-Alanine (C) -0.2 -0.1 -2.5 -0.0 +0.1
phagefrs Time16-FRS +0.3 +0.1 -2.6 -0.3 -0.1
carbon source m-Inositol (C) -0.2 -0.4 -1.8 +0.1 -0.3
nophagecontrol Time16-nophage +0.2 -0.3 -1.8 -0.5 -0.2
nitrogen source Ammonium chloride (N) -0.7 -0.3 -1.3 -0.4 +0.4
anaerobic N2E2wt with N1B4m denitrifying repA -0.2 -0.2 -2.5 +0.3 +0.3
phagefrs Time16-FRS +0.4 +0.1 -2.2 -0.4 -0.2
carbon source D-Trehalose (C) -0.2 -0.3 -1.9 -0.1 +0.3
nitrogen source L-Histidine (N) +0.3 -0.1 -2.3 -0.0 +0.1
nophagecontrol Time16-nophage +0.5 -0.1 -1.9 -0.1 -0.4
nitrogen source L-Glutamic (N) +0.2 -0.1 -2.7 +0.2 +0.3
nitrogen source Putrescine (N) +0.1 +0.1 -2.3 +0.2 +0.1
carbon source L-Leucine (C) -0.0 +0.2 -2.4 +0.5 +0.2
lb LB +0.6 -0.2 -1.9 -0.0 +0.0
carbon source carbon source Sucrose 0.5mM -1.2 -0.9 +0.7 -0.3 +0.1
carbon source Fumarate (C) +0.5 +0.1 -2.0 -0.1 +0.1
stress Dimethyl Sulfoxide 5 vol% -0.6 +0.2 -1.5 +0.3 +0.3
anaerobic N2E2wt with N1B4m denitrifying repA -0.2 +0.3 -2.1 +0.2 +0.6
carbon source D,L-Lactate (C) +0.5 -0.3 -1.5 +0.2 +0.4
stress methylglyoxal 0.008 vol% -0.8 -0.7 +1.7 -0.7 -0.0
stress Doxycycline hyclate 0.0001 mg/ml -0.8 -0.3 +1.1 +0.4 +0.2
stress Fusidic 0.125 mg/ml -0.3 -0.7 +2.1 -0.0 +0.2
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