Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_5686 and Pf1N1B4_5687 are separated by 132 nucleotidesPf1N1B4_5687 and Pf1N1B4_5688 are separated by 57 nucleotidesPf1N1B4_5688 and Pf1N1B4_5689 are separated by 11 nucleotidesPf1N1B4_5689 and Pf1N1B4_5690 are separated by 70 nucleotides Pf1N1B4_5686 - Permease of the drug/metabolite transporter (DMT) superfamily, at 125,838 to 126,239 _5686 Pf1N1B4_5687 - Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system, at 126,372 to 126,809 _5687 Pf1N1B4_5688 - hypothetical protein, at 126,867 to 127,196 _5688 Pf1N1B4_5689 - Lactoylglutathione lyase, at 127,208 to 127,600 _5689 Pf1N1B4_5690 - Putative TEGT family carrier/transport protein, at 127,671 to 128,387 _5690
Group Condition Pf1N1B4_5686 Pf1N1B4_5687 Pf1N1B4_5688 Pf1N1B4_5689 Pf1N1B4_5690
stress Sisomicin 0.001 mg/ml N.D. N.D. -0.1 -0.6 -2.7
carbon source carbon source Sucrose 1mM N.D. N.D. -0.6 -0.5 -1.8
carbon source octanoate (C) N.D. N.D. -1.5 -0.3 -1.0
stress Spectinomycin 0.05 mg/ml N.D. N.D. -0.1 +0.0 -2.5
nitrogen source Cytidine (N) N.D. N.D. -0.9 +0.6 -1.8
nitrogen source Adenine (N) N.D. N.D. -0.8 -0.6 -0.6
pH Minimal media pH9 N.D. N.D. -0.2 +0.3 -2.1
stress nitrite 10 mM N.D. N.D. -0.6 -0.2 -1.2
pH Minimal media pH9 N.D. N.D. -0.5 -0.8 -0.6
stress Gentamicin 0.001 mg/ml N.D. N.D. +0.0 +0.1 -2.0
carbon source D-Lactate (C) N.D. N.D. -0.6 -0.5 -0.6
nitrogen source nitrate (N) N.D. N.D. -1.1 -0.5 -0.2
nophagecontrol Time16-nophage N.D. N.D. -0.4 -0.4 -0.9
carbon source carbon source Sucrose 1mM N.D. N.D. -0.2 -1.6 +0.2
nitrogen source Uridine (N) N.D. N.D. -0.6 -0.3 -0.7
lb LB N.D. N.D. -0.1 -0.3 -1.2
temperature LB 37C N.D. N.D. +0.0 -0.6 -1.1
carbon source L-Glutamic (C) N.D. N.D. -0.6 -0.7 -0.1
stress Cisplatin 0.006 mg/ml N.D. N.D. -0.3 -0.5 -0.7
nitrogen source Thymine (N) N.D. N.D. -0.9 -0.5 -0.0
stress Spectinomycin 0.025 mg/ml N.D. N.D. +0.3 -0.8 -0.8
carbon source m-Inositol (C) N.D. N.D. -1.0 +0.0 -0.4
carbon source L-Arginine (C) N.D. N.D. -0.3 -0.4 -0.7
stress Chloride 300 mM N.D. N.D. +0.0 +0.1 -1.2
stress sodium fluoride 12.5 mM N.D. N.D. -0.6 -0.6 +0.2
stress Rifampicin 0.004 mg/ml N.D. N.D. -0.2 +0.5 -0.8
nitrogen source L-Methionine (N) N.D. N.D. +0.5 -0.4 -0.5
denitrifying Nitrate reduction, replicate C N.D. N.D. -0.6 +0.4 +0.3
carbon source carbon source Sucrose 5mM N.D. N.D. +0.3 +0.6 -0.4
stress Fusidic 0.125 mg/ml N.D. N.D. -0.2 +0.7 +0.6
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