Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_5649 and Pf1N1B4_5650 are separated by 175 nucleotidesPf1N1B4_5650 and Pf1N1B4_5651 are separated by 184 nucleotidesPf1N1B4_5651 and Pf1N1B4_5652 are separated by 119 nucleotidesPf1N1B4_5652 and Pf1N1B4_5653 are separated by 149 nucleotides Pf1N1B4_5649 - 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34), at 76,543 to 77,766 _5649 Pf1N1B4_5650 - Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipi n synthases and related enzymes, at 77,942 to 79,588 _5650 Pf1N1B4_5651 - ChlD component of cobalt chelatase involved in B12 biosynthesis, at 79,773 to 80,318 _5651 Pf1N1B4_5652 - ChlI component of cobalt chelatase involved in B12 biosynthesis, at 80,438 to 81,448 _5652 Pf1N1B4_5653 - CobN component of cobalt chelatase involved in B12 biosynthesis, at 81,598 to 85,464 _5653
Group Condition Pf1N1B4_5649 Pf1N1B4_5650 Pf1N1B4_5651 Pf1N1B4_5652 Pf1N1B4_5653
carbon source Putrescine (C) -1.2 +0.3 N.D. -1.9 -0.9
carbon source L-Arginine (C) -1.3 -0.1 N.D. -0.8 -1.1
carbon source carbon source Sucrose 0.25mM -0.6 -1.7 N.D. -2.0 +1.1
carbon source L-Alanine (C) -1.5 +0.0 N.D. -1.3 -0.1
nitrogen source L-Glutamic (N) -0.2 -0.0 N.D. -1.4 -1.3
nitrogen source nitrogen source nitrite 0.1mM +0.1 -2.1 N.D. -0.7 +0.0
carbon source Uridine (C) -2.2 +0.1 N.D. -0.5 +0.1
carbon source L-Glutamic (C) -0.8 +0.1 N.D. -0.9 -0.7
nitrogen source L-Histidine (N) +0.2 -0.1 N.D. -1.2 -0.8
carbon source Tween 20 (C) -0.5 +0.2 N.D. -1.1 -0.5
anaerobic N2E2wt with N1B4m denitrifying repA +0.4 -0.3 N.D. -2.0 +0.3
stress sodium fluoride 12.5 mM -1.2 +0.5 N.D. -0.4 -0.2
carbon source carbon source Sucrose 0.5mM -1.0 -0.8 N.D. +0.9 -0.1
carbon source carbon source Sucrose 1mM -0.9 -1.8 N.D. +1.2 +0.5
carbon source carbon source Sucrose 0.25mM +1.0 -1.8 N.D. +0.7 -0.6
stress Aluminum chloride 2.5 mM -1.0 +0.8 N.D. -0.7 +0.3
nitrogen source nitrogen source nitrite 0.1mM -1.3 -0.7 N.D. +1.0 +0.8
nitrogen source nitrogen source nitrite 1mM +0.3 -1.3 N.D. +0.2 +0.6
carbon source D-Glucose (C) +0.5 +0.7 N.D. -1.4 +0.0
nitrogen source D-Glucosamine Hydrochloride (N) -0.5 +1.6 N.D. +0.0 -1.0
carbon source carbon source Sucrose 1mM -0.9 -0.4 N.D. +0.9 +0.7
carbon source carbon source Sucrose 20mM +0.7 -1.2 N.D. +0.7 +0.5
carbon source D-Fructose (C) +0.0 +2.1 N.D. -0.4 -0.4
carbon source D-Fructose (C) -0.2 +2.1 N.D. -0.5 -0.0
carbon source L-Arabinose (C) +0.2 +1.6 N.D. -0.1 -0.4
temperature LB 37C -0.9 +1.6 N.D. +0.2 +0.7
denitrifying Nitrate reduction, replicate A t2 +0.7 +0.1 N.D. +1.2 -0.3
carbon source carbon source Sucrose 5mM +1.0 +0.1 N.D. +1.1 +0.7
temperature LB 37C +0.7 +1.9 N.D. +0.1 +0.2
nitrogen source Cytidine (N) +1.1 +0.5 N.D. +0.9 +0.8
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