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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N1B4
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Pf1N1B4_5646 and Pf1N1B4_5647 are separated by 197 nucleotides
Pf1N1B4_5647 and Pf1N1B4_5648 are separated by 133 nucleotides
Pf1N1B4_5648 and Pf1N1B4_5649 are separated by 77 nucleotides
Pf1N1B4_5649 and Pf1N1B4_5650 are separated by 175 nucleotides
Pf1N1B4_5646 - hypothetical protein, at 75,131 to 75,280
_5646
Pf1N1B4_5647 - hypothetical protein, at 75,478 to 75,927
_5647
Pf1N1B4_5648 - transcriptional regulator, MerR family, at 76,061 to 76,465
_5648
Pf1N1B4_5649 - 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34), at 76,543 to 77,766
_5649
Pf1N1B4_5650 - Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipi n synthases and related enzymes, at 77,942 to 79,588
_5650
Group
Condition
Pf1N1B4
_5646
Pf1N1B4
_5647
Pf1N1B4
_5648
Pf1N1B4
_5649
Pf1N1B4
_5650
carbon source
carbon source Sucrose 1mM
N.D.
+0.2
N.D.
-0.9
-1.8
nitrogen source
nitrogen source nitrite 0.1mM
N.D.
-0.4
N.D.
+0.1
-2.1
carbon source
carbon source Sucrose 0.25mM
N.D.
-0.2
N.D.
-0.6
-1.7
nitrogen source
nitrogen source nitrite 0.1mM
N.D.
-0.2
N.D.
-1.3
-0.7
carbon source
Uridine (C)
N.D.
-0.1
N.D.
-2.2
+0.1
lb
LB
N.D.
-0.4
N.D.
-0.8
-0.6
stress
Dimethyl Sulfoxide 5 vol%
N.D.
+0.0
N.D.
-1.6
-0.0
carbon source
carbon source Sucrose 0.5mM
N.D.
+0.3
N.D.
-1.0
-0.8
carbon source
L-Alanine (C)
N.D.
+0.4
N.D.
-1.5
+0.0
nitrogen source
nitrogen source nitrite 1mM
N.D.
+0.3
N.D.
+0.3
-1.3
carbon source
carbon source Sucrose 0.25mM
N.D.
+0.3
N.D.
+1.0
-1.8
stress
Aluminum chloride 2.5 mM
N.D.
-0.2
N.D.
-1.0
+0.8
carbon source
carbon source Sucrose 20mM
N.D.
+0.2
N.D.
+0.7
-1.2
stress
sodium fluoride 12.5 mM
N.D.
+0.4
N.D.
-1.2
+0.5
temperature
LB 37C
N.D.
+0.5
N.D.
-0.9
+1.6
nitrogen source
D-Glucosamine Hydrochloride (N)
N.D.
+0.1
N.D.
-0.5
+1.6
carbon source
D-Glucose (C)
N.D.
+0.4
N.D.
+0.5
+0.7
nitrogen source
Thymine (N)
N.D.
+0.6
N.D.
+0.9
+0.1
carbon source
D-Gluconic Acid (C)
N.D.
+0.6
N.D.
+0.5
+0.6
carbon source
D-Galactose (C)
N.D.
+0.3
N.D.
+0.1
+1.4
nitrogen source
Ammonium chloride (N)
N.D.
+0.8
N.D.
+0.5
+0.6
carbon source
D-Ribose (C)
N.D.
+0.3
N.D.
+0.5
+1.1
carbon source
D-Fructose (C)
N.D.
+0.1
N.D.
-0.2
+2.1
carbon source
D-Galactose (C)
N.D.
+0.6
N.D.
+0.0
+1.4
temperature
LB 37C
N.D.
-0.5
N.D.
+0.7
+1.9
nitrogen source
Cytosine (N)
N.D.
+1.0
N.D.
+0.7
+0.4
nitrogen source
Cytidine (N)
N.D.
+0.7
N.D.
+1.1
+0.5
carbon source
L-Arabinose (C)
N.D.
+0.5
N.D.
+0.2
+1.6
carbon source
D-Fructose (C)
N.D.
+0.3
N.D.
+0.0
+2.1
carbon source
L-Arabinose (C)
N.D.
+0.6
N.D.
+0.2
+1.7
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