Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_5569 and Pf1N1B4_5570 are separated by 835 nucleotidesPf1N1B4_5570 and Pf1N1B4_5571 are separated by 206 nucleotidesPf1N1B4_5571 and Pf1N1B4_5572 are separated by 18 nucleotidesPf1N1B4_5572 and Pf1N1B4_5573 are separated by 807 nucleotides Pf1N1B4_5569 - hypothetical protein, at 340,333 to 340,686 _5569 Pf1N1B4_5570 - hypothetical protein, at 341,522 to 341,836 _5570 Pf1N1B4_5571 - hypothetical protein, at 342,043 to 342,300 _5571 Pf1N1B4_5572 - DNA recombination-dependent growth factor C, at 342,319 to 343,245 _5572 Pf1N1B4_5573 - hypothetical protein, at 344,053 to 344,199 _5573
Group Condition Pf1N1B4_5569 Pf1N1B4_5570 Pf1N1B4_5571 Pf1N1B4_5572 Pf1N1B4_5573
carbon source acetate (C) N.D. -0.3 -0.4 -0.5 N.D.
carbon source carbon source Sucrose 20mM N.D. -0.3 -0.6 -0.3 N.D.
stress Fusidic 0.0625 mg/ml N.D. +0.2 -0.5 -0.2 N.D.
anaerobic N2E2wt with N1B4m denitrifying repA N.D. -0.1 +0.3 -0.7 N.D.
denitrifying Nitrate reduction, replicate C N.D. -0.5 -0.1 +0.3 N.D.
stress Rifampicin 0.004 mg/ml N.D. -0.1 +0.5 -0.4 N.D.
carbon source pyruvate (C) N.D. -0.1 +0.5 -0.4 N.D.
stress Benzethonium chloride 0.0125 mM N.D. -0.4 +0.2 +0.5 N.D.
denitrifying Nitrate reduction, replicate A t1 N.D. +0.2 +0.6 -0.4 N.D.
denitrifying Nitrate reduction, replicate B t2 N.D. +0.3 +0.3 -0.3 N.D.
denitrifying Nitrate reduction, replicate A t2 N.D. +0.5 +0.6 -0.5 N.D.
carbon source carbon source Sucrose 0.25mM N.D. +0.7 +0.5 -0.2 N.D.
stress Carbenicillin 2 mg/ml N.D. +0.3 +0.2 +0.4 N.D.
nitrogen source Uridine (N) N.D. +0.1 +0.6 +0.4 N.D.
nitrogen source Cytidine (N) N.D. +0.0 +0.4 +0.6 N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 N.D. +0.2 +0.3 +0.6 N.D.
carbon source Uridine (C) N.D. +0.6 +0.3 +0.2 N.D.
nitrogen source L-Methionine (N) N.D. +0.4 +0.3 +0.5 N.D.
stress Choline chloride 200 mM N.D. +0.2 +0.3 +0.6 N.D.
stress Choline Lysine 6 mM N.D. +0.5 +0.4 +0.2 N.D.
carbon source L-Leucine (C) N.D. +0.6 +0.4 +0.2 N.D.
denitrifying Nitrate reduction, replicate C t2 N.D. +0.3 +0.6 +0.3 N.D.
stress methylglyoxal 0.008 vol% N.D. +0.5 +0.7 +0.1 N.D.
stress Fusidic 0.125 mg/ml N.D. +0.6 +0.4 +0.3 N.D.
stress Dimethyl Sulfoxide 6.5 vol% N.D. +0.7 +0.4 +0.3 N.D.
pH Minimal media pH9 N.D. +0.8 +0.4 +0.4 N.D.
carbon source carbon source Sucrose 1mM N.D. +0.3 +0.6 +0.7 N.D.
stress nitrate 100 mM N.D. +0.6 +0.5 +0.5 N.D.
pH Minimal media pH9 N.D. +0.9 +0.7 +0.1 N.D.
carbon source carbon source Sucrose 0.25mM N.D. +0.5 +0.8 +0.4 N.D.
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