Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_5529 and Pf1N1B4_5530 are separated by 161 nucleotidesPf1N1B4_5530 and Pf1N1B4_5531 are separated by 79 nucleotidesPf1N1B4_5531 and Pf1N1B4_5532 are separated by 836 nucleotidesPf1N1B4_5532 and Pf1N1B4_5533 are separated by 1500 nucleotides Pf1N1B4_5529 - hypothetical protein, at 288,321 to 289,550 _5529 Pf1N1B4_5530 - hypothetical protein, at 289,712 to 290,338 _5530 Pf1N1B4_5531 - hypothetical protein, at 290,418 to 290,804 _5531 Pf1N1B4_5532 - hypothetical protein, at 291,641 to 293,752 _5532 Pf1N1B4_5533 - cobS protein, putative, at 295,253 to 296,158 _5533
Group Condition Pf1N1B4_5529 Pf1N1B4_5530 Pf1N1B4_5531 Pf1N1B4_5532 Pf1N1B4_5533
stress Chloride 200 mM -0.4 -0.3 -1.1 -0.1 -1.0
pH Minimal media pH9 -0.2 -0.0 -0.8 -0.2 -0.9
carbon source carbon source Sucrose 0.25mM +0.1 -0.5 -0.4 -0.5 -0.7
carbon source carbon source Sucrose 5mM +0.1 -0.3 -1.5 +0.2 -0.3
stress Choline chloride 200 mM -0.4 -0.4 -0.1 -0.3 -0.6
carbon source acetate (C) -0.1 -0.2 -0.4 -0.4 -0.6
stress Chloride 300 mM -0.3 +0.0 +0.4 -0.2 -1.6
stress Paraquat dichloride 0.016 mg/mL -0.2 -0.1 -0.4 -0.0 -1.1
carbon source D-Galactose (C) -0.0 +0.1 -1.4 -0.0 -0.3
stress sodium fluoride 12.5 mM -0.3 +0.1 -0.3 -0.3 -0.8
stress Doxycycline hyclate 0.0001 mg/ml -0.0 -0.2 -1.7 +0.2 +0.2
stress 1-ethyl-3-methylimidazolium chloride 80 mM -0.3 -0.4 +0.4 -0.3 -0.9
temperature LB 37C +0.0 -0.3 -0.5 -0.9 +0.2
nitrogen source Adenine (N) +0.1 +0.2 -1.2 +0.1 -0.5
carbon source a-Ketoglutaric (C) +0.1 +0.3 -0.4 +0.3 -1.5
pH Minimal media pH9 +0.0 +0.3 -0.4 -0.0 -1.0
nitrogen source Uridine (N) -0.0 -0.4 -0.3 +0.3 -0.7
carbon source carbon source Sucrose 0.5mM -0.6 +0.2 -0.6 +0.3 -0.4
carbon source carbon source Sucrose 1mM +0.3 -0.1 -1.0 +0.3 -0.1
stress Nalidixic 0.004 mg/ml -0.6 -0.5 +0.4 +0.0 +0.3
stress Sisomicin 0.001 mg/ml -0.3 -0.2 +1.0 -0.0 -0.8
carbon source carbon source Sucrose 1mM +0.2 +0.1 +0.5 -0.2 -1.0
carbon source D-Galactose (C) -0.1 +0.5 +0.3 +0.2 -1.1
temperature LB 37C -0.4 -0.4 -0.2 +0.3 +0.6
stress nitrite 10 mM -0.2 -0.2 +0.5 +0.5 -0.6
carbon source carbon source Sucrose 5mM -0.0 -0.2 +0.7 -0.4 +0.4
anaerobic N2E2wt with N1B4m denitrifying repA +0.0 -0.6 +0.8 +0.6 -0.3
anaerobic N2E2wt with N1B4m denitrifying repB +0.0 -0.1 -0.6 +0.3 +0.8
carbon source L-Arabinose (C) +0.1 +0.2 +0.5 -0.5 +0.3
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 +0.7 +0.3 +0.3 -0.4 +0.6
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