Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_51 and Pf1N1B4_52 are separated by 337 nucleotidesPf1N1B4_52 and Pf1N1B4_53 are separated by 6 nucleotidesPf1N1B4_53 and Pf1N1B4_54 are separated by 194 nucleotidesPf1N1B4_54 and Pf1N1B4_55 are separated by 237 nucleotides Pf1N1B4_51 - hypothetical protein, at 57,079 to 57,348 _51 Pf1N1B4_52 - FIG00956056: hypothetical protein, at 57,686 to 58,144 _52 Pf1N1B4_53 - hypothetical protein, at 58,151 to 58,342 _53 Pf1N1B4_54 - Cyclohexadienyl dehydratase (EC 4.2.1.51)(EC 4.2.1.91), at 58,537 to 59,328 _54 Pf1N1B4_55 - FIG00961388: hypothetical protein, at 59,566 to 59,892 _55
Group Condition Pf1N1B4_51 Pf1N1B4_52 Pf1N1B4_53 Pf1N1B4_54 Pf1N1B4_55
anaerobic Nitrate reduction -0.7 N.D. -0.7 -0.7 -0.3
pH Minimal media pH9 -1.8 N.D. -0.1 +0.3 -0.8
temperature LB 37C -0.9 N.D. -0.6 -0.4 -0.4
anaerobic Nitrate reduction -1.2 N.D. -0.5 +0.4 -0.3
carbon source octanoate (C) -0.4 N.D. -0.2 +0.3 -0.7
stress 1-ethyl-3-methylimidazolium lysine 5 mM +0.4 N.D. -1.2 -0.2 +0.3
carbon source carbon source Sucrose 0.25mM +0.4 N.D. -0.5 -0.7 +0.0
carbon source carbon source Sucrose 0.5mM +0.7 N.D. -0.4 -0.8 -0.1
carbon source carbon source Sucrose 5mM -1.2 N.D. -0.3 +0.3 +0.5
carbon source D-Mannose (C) -0.5 N.D. -0.4 +0.7 -0.4
nitrogen source Uridine (N) -0.7 N.D. +0.2 +0.4 -0.4
carbon source carbon source Sucrose 1mM +1.0 N.D. -0.8 +0.2 -0.6
nitrogen source Thymine (N) -0.8 N.D. +0.2 +0.6 -0.2
lb LB +0.4 N.D. -0.6 +0.5 -0.5
stress 1-ethyl-3-methylimidazolium chloride 80 mM +0.5 N.D. -0.8 -0.0 +0.3
carbon source L-Valine (C) -0.1 N.D. -0.4 +0.8 -0.3
stress Cephalothin 2.5 mg/ml +0.1 N.D. -0.4 +0.8 -0.5
nitrogen source L-Citrulline (N) -0.2 N.D. -0.1 +0.8 -0.4
stress Fusidic 0.125 mg/ml -0.6 N.D. +0.3 +0.5 -0.1
nitrogen source Cytosine (N) -0.6 N.D. +0.3 +0.6 -0.1
nitrogen source Carnitine Hydrochloride (N) -0.4 N.D. +0.2 +0.8 -0.4
nitrogen source Ammonium chloride (N) -0.7 N.D. +0.2 +0.7 -0.0
stress Aluminum chloride 2.5 mM +0.4 N.D. -0.9 +0.7 +0.1
nitrogen source nitrate (N) -0.8 N.D. +0.8 +0.5 -0.1
carbon source Carnitine Hydrochloride (C) +0.3 N.D. -0.0 +1.0 -0.7
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 +0.8 N.D. +0.3 +0.1 -0.4
stress nitrite 10 mM +0.6 N.D. -0.4 +0.3 +0.4
denitrifying Nitrate reduction, replicate B +0.3 N.D. +0.7 +0.5 -0.4
denitrifying Nitrate reduction, replicate A t2 +0.6 N.D. +0.5 +0.2 +0.3
carbon source carbon source Sucrose 1mM +1.0 N.D. -0.3 +0.3 +0.5
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