Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_525 and Pf1N1B4_526 are separated by 9 nucleotidesPf1N1B4_526 and Pf1N1B4_527 are separated by 51 nucleotidesPf1N1B4_527 and Pf1N1B4_528 are separated by 175 nucleotidesPf1N1B4_528 and Pf1N1B4_529 are separated by 82 nucleotides Pf1N1B4_525 - Agmatinase (EC 3.5.3.11), at 624,569 to 625,519 _525 Pf1N1B4_526 - Undecaprenyl pyrophosphate synthase, at 625,529 to 625,951 _526 Pf1N1B4_527 - Cytosine/purine/uracil/thiamine/allantoin permease family protein, at 626,003 to 627,514 _527 Pf1N1B4_528 - sodium-solute symporter, putative, at 627,690 to 629,069 _528 Pf1N1B4_529 - SoxH protein, homolog, at 629,152 to 629,877 _529
Group Condition Pf1N1B4_525 Pf1N1B4_526 Pf1N1B4_527 Pf1N1B4_528 Pf1N1B4_529
temperature LB 37C -1.5 +0.0 -0.4 -0.2 -0.2
temperature LB 37C -0.4 -0.5 -0.2 -0.5 -0.2
stress methylglyoxal 0.004 vol% -0.2 -0.7 -0.2 -0.0 -0.7
lb LB -0.8 -0.5 +0.3 -0.1 -0.4
stress Dimethyl Sulfoxide 6.5 vol% -0.9 -0.6 +0.2 +0.0 -0.0
anaerobic Nitrate reduction -1.0 -0.3 -0.1 -0.1 +0.3
stress Thallium(I) acetate 0.008 mg/ml -0.9 +0.3 +0.1 -0.2 -0.4
lb LB +0.3 -0.8 +0.1 -0.1 -0.4
carbon source carbon source Sucrose 0.25mM -0.0 -1.1 +0.0 -0.2 +0.4
carbon source carbon source Sucrose 0.25mM -0.4 -0.5 -0.2 -0.2 +0.4
nitrogen source L-Lysine (N) -0.9 -0.3 +0.2 +0.1 +0.2
carbon source carbon source Sucrose 1mM +0.7 -0.3 +0.0 -0.5 -0.4
stress Cisplatin 0.006 mg/ml -1.0 +0.4 +0.3 -0.0 -0.1
lb LB -0.2 -1.0 +0.2 +0.4 +0.2
stress benzoic 0.58 mg/ml -1.1 +0.3 +0.1 +0.3 +0.3
stress nitrate 100 mM -0.6 +0.1 +0.3 +0.3 -0.2
carbon source L-Isoleucine (C) -0.5 +0.7 +0.3 -0.3 -0.1
anaerobic N2E2wt with N1B4m denitrifying repA -0.1 +0.5 -0.2 +0.4 -0.5
denitrifying Nitrate reduction, replicate C -1.0 +0.1 +0.4 +0.5 +0.0
lb LB +0.7 -0.6 +0.1 +0.2 -0.2
stress Cisplatin 0.006 mg/ml -0.6 +1.0 +0.1 -0.1 +0.3
nitrogen source nitrogen source nitrite 1mM -0.7 +0.3 +0.8 -0.1 +0.4
nitrogen source nitrogen source nitrite 0.1mM -0.7 +1.0 +1.2 +0.1 -0.8
nitrogen source nitrogen source nitrite 1mM -0.3 +0.9 +0.9 -0.2 -0.1
nitrogen source Cytidine (N) -0.1 +1.0 +0.4 -0.3 +0.3
carbon source D-Trehalose (C) -0.5 +0.7 +1.0 +0.1 +0.2
nitrogen source Thymine (N) -0.2 +0.7 +0.4 +0.4 +0.5
nitrogen source nitrogen source nitrite 0.5mM -0.0 +1.5 +1.5 -0.1 -0.5
nitrogen source nitrogen source nitrite 0.5mM +0.3 +1.0 +1.6 -0.2 -0.4
nitrogen source nitrogen source nitrite 0.1mM +0.3 +1.5 +1.5 -0.1 -0.1
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