Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_5091 and Pf1N1B4_5092 are separated by 83 nucleotidesPf1N1B4_5092 and Pf1N1B4_5093 overlap by 10 nucleotidesPf1N1B4_5093 and Pf1N1B4_5094 are separated by 1121 nucleotidesPf1N1B4_5094 and Pf1N1B4_5095 are separated by 80 nucleotides Pf1N1B4_5091 - hypothetical protein, at 5,642,755 to 5,644,173 _5091 Pf1N1B4_5092 - UDP-glucose 4-epimerase (EC 5.1.3.2), at 5,644,257 to 5,645,321 _5092 Pf1N1B4_5093 - Endo-beta-1,3-glucanase, at 5,645,312 to 5,646,790 _5093 Pf1N1B4_5094 - Methyl-accepting chemotaxis protein, at 5,647,912 to 5,648,736 _5094 Pf1N1B4_5095 - hypothetical protein, at 5,648,817 to 5,649,380 _5095
Group Condition Pf1N1B4_5091 Pf1N1B4_5092 Pf1N1B4_5093 Pf1N1B4_5094 Pf1N1B4_5095
stress Fusidic 0.125 mg/ml -0.7 N.D. +0.2 N.D. -2.5
carbon source carbon source Sucrose 0.25mM -0.8 N.D. -0.4 N.D. -1.3
carbon source carbon source Sucrose 0.25mM -0.2 N.D. -0.3 N.D. -1.3
carbon source carbon source Sucrose 1mM -1.0 N.D. -0.5 N.D. -0.3
nitrogen source nitrogen source nitrate 20mM -0.4 N.D. -0.5 N.D. -0.8
nitrogen source nitrogen source nitrite 0.1mM -2.2 N.D. +0.4 N.D. +0.3
stress 1-ethyl-3-methylimidazolium lysine 5 mM -0.3 N.D. +0.2 N.D. -1.4
nitrogen source nitrogen source nitrite 1mM -0.7 N.D. -0.4 N.D. -0.3
anaerobic Nitrate reduction +0.2 N.D. +0.1 N.D. -1.6
stress nitrate 100 mM -0.4 N.D. +0.4 N.D. -1.2
stress methylglyoxal 0.004 vol% -0.2 N.D. +0.4 N.D. -1.3
lb LB +0.0 N.D. +0.7 N.D. -1.3
stress Choline Lysine 6 mM +0.1 N.D. +0.3 N.D. -1.1
denitrifying Nitrate reduction, replicate A -0.0 N.D. +0.4 N.D. -1.0
phagefrs Time6-FRS -1.0 N.D. +0.5 N.D. +0.1
stress 5-Hydroxymethylfurfural 2.5 mM -0.4 N.D. +0.6 N.D. -0.6
stress Choline chloride 200 mM +0.1 N.D. +0.5 N.D. -1.0
carbon source L-Arabinose (C) +0.2 N.D. +0.5 N.D. -0.9
lb LB -0.7 N.D. -0.1 N.D. +0.6
stress methylglyoxal 0.008 vol% -0.1 N.D. +0.8 N.D. -0.8
lb LB -0.2 N.D. -0.5 N.D. +0.8
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A +0.4 N.D. +0.3 N.D. -0.7
stress Chloride 200 mM +0.3 N.D. +0.6 N.D. -0.8
pH Minimal media pH9 +0.5 N.D. -0.9 N.D. +0.5
lb LB +0.3 N.D. +0.6 N.D. -0.8
stress 1-ethyl-3-methylimidazolium chloride 80 mM +0.4 N.D. +0.7 N.D. -0.8
nitrogen source D-Glucosamine Hydrochloride (N) +0.6 N.D. +0.9 N.D. -0.5
carbon source D-Ribose (C) +0.3 N.D. +0.6 N.D. +0.5
carbon source D-Ribose (C) +0.3 N.D. +0.7 N.D. +0.5
carbon source D-Lactate (C) +0.5 N.D. +0.8 N.D. +0.7
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