Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_5040 and Pf1N1B4_5041 are separated by 31 nucleotidesPf1N1B4_5041 and Pf1N1B4_5042 overlap by 1 nucleotidesPf1N1B4_5042 and Pf1N1B4_5043 are separated by 289 nucleotidesPf1N1B4_5043 and Pf1N1B4_5044 are separated by 402 nucleotides Pf1N1B4_5040 - Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205), at 5,585,254 to 5,585,694 _5040 Pf1N1B4_5041 - Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4), at 5,585,726 to 5,586,112 _5041 Pf1N1B4_5042 - Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4), at 5,586,112 to 5,588,811 _5042 Pf1N1B4_5043 - hypothetical protein, at 5,589,101 to 5,589,232 _5043 Pf1N1B4_5044 - hypothetical protein, at 5,589,635 to 5,589,994 _5044
Group Condition Pf1N1B4_5040 Pf1N1B4_5041 Pf1N1B4_5042 Pf1N1B4_5043 Pf1N1B4_5044
nitrogen source nitrate (N) -0.3 -1.0 -1.7 -0.5 N.D.
nitrogen source nitrogen source nitrite 1mM -0.8 -0.8 -0.5 -0.7 N.D.
nitrogen source nitrogen source nitrate 5mM -0.1 -1.0 -0.7 -0.7 N.D.
nitrogen source nitrogen source nitrate 20mM +0.3 -0.4 -0.7 -1.6 N.D.
temperature LB 37C +0.5 -0.1 -0.9 -1.9 N.D.
nitrogen source nitrogen source nitrate 20mM -0.2 -0.4 -1.1 -0.6 N.D.
nitrogen source nitrogen source nitrite 0.1mM -0.6 +0.8 +0.1 -2.3 N.D.
nitrogen source Adenine (N) -0.1 +0.6 -0.9 -1.3 N.D.
nitrogen source nitrogen source nitrate 5mM +0.2 -0.7 -0.5 -0.7 N.D.
carbon source carbon source Sucrose 0.25mM -0.9 -0.5 +0.2 -0.3 N.D.
denitrifying Nitrate reduction, replicate C t1 -0.6 -0.4 -0.1 -0.4 N.D.
stress nitrate 100 mM -0.3 +0.4 -0.4 -0.8 N.D.
stress D-Cycloserine 0.1 mg/ml -0.2 +0.3 -0.3 -0.7 N.D.
carbon source carbon source Sucrose 0.5mM -0.5 +0.7 -0.2 -0.9 N.D.
stress Choline Lysine 6 mM -0.4 +0.2 +0.1 -0.8 N.D.
nitrogen source Cytidine (N) -0.1 +0.5 -0.6 -0.6 N.D.
stress methylglyoxal 0.004 vol% -0.8 +0.8 -0.1 -0.5 N.D.
anaerobic Nitrate reduction -0.3 -0.6 -0.3 +0.5 N.D.
stress copper (II) chloride 2.5 mM +0.4 +0.3 +0.0 -1.3 N.D.
carbon source carbon source Sucrose 1mM +0.6 -0.5 -0.6 +0.1 N.D.
stress Rifampicin 0.004 mg/ml +0.4 -0.1 +0.2 -0.9 N.D.
anaerobic Nitrate reduction +0.8 -0.4 +0.0 -0.7 N.D.
stress Sisomicin 0.001 mg/ml -0.1 +0.9 -0.4 -0.4 N.D.
lb LB +0.7 +0.2 +0.1 -0.9 N.D.
carbon source carbon source Sucrose 1mM +0.0 +0.7 +0.4 -1.1 N.D.
stress Chloride 200 mM -0.6 +0.8 -0.2 +0.4 N.D.
stress Carbenicillin 2 mg/ml +0.2 +0.8 -0.3 -0.2 N.D.
carbon source carbon source Sucrose 5mM +0.5 +0.5 +0.2 -0.4 N.D.
denitrifying Nitrate reduction, replicate C +0.2 +0.9 +0.4 +0.8 N.D.
carbon source octanoate (C) +0.9 +0.3 +0.4 +1.4 N.D.
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