Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_4983 and Pf1N1B4_4984 are separated by 748 nucleotidesPf1N1B4_4984 and Pf1N1B4_4985 are separated by 26 nucleotidesPf1N1B4_4985 and Pf1N1B4_4986 are separated by 61 nucleotidesPf1N1B4_4986 and Pf1N1B4_4987 overlap by 18 nucleotides Pf1N1B4_4983 - Polyhydroxyalkanoic acid synthase, at 5,522,829 to 5,524,586 _4983 Pf1N1B4_4984 - FIG01200701: possible membrane protein, at 5,525,335 to 5,526,807 _4984 Pf1N1B4_4985 - putative exported protein, at 5,526,834 to 5,527,721 _4985 Pf1N1B4_4986 - mannuronan C-5-epimerase, putative, at 5,527,783 to 5,532,615 _4986 Pf1N1B4_4987 - hypothetical protein, at 5,532,598 to 5,532,744 _4987
Group Condition Pf1N1B4_4983 Pf1N1B4_4984 Pf1N1B4_4985 Pf1N1B4_4986 Pf1N1B4_4987
stress Nalidixic 0.004 mg/ml -0.1 -0.3 -1.1 -0.4 N.D.
carbon source carbon source Sucrose 1mM -0.5 -0.0 -0.8 -0.4 N.D.
stress 1-ethyl-3-methylimidazolium chloride 80 mM -0.0 -0.5 -0.5 -0.2 N.D.
stress 5-Hydroxymethylfurfural 2.5 mM -0.5 -0.0 -0.5 -0.2 N.D.
stress Fusidic 0.125 mg/ml -0.1 -0.2 -0.5 -0.2 N.D.
carbon source carbon source Sucrose 5mM -0.5 +0.1 -0.4 -0.3 N.D.
stress methylglyoxal 0.004 vol% -0.2 -0.3 -0.5 -0.1 N.D.
nitrogen source Cytidine (N) -0.3 +0.1 -0.4 -0.2 N.D.
stress Choline Lysine 6 mM +0.1 -0.1 -0.6 -0.2 N.D.
carbon source L-Citrulline (C) +0.2 -0.4 -0.4 -0.1 N.D.
carbon source butyrate (C) +0.2 -0.3 -0.4 +0.0 N.D.
carbon source Putrescine (C) +0.2 +0.0 -0.5 -0.2 N.D.
stress Dimethyl Sulfoxide 6.5 vol% +0.3 -0.3 -0.4 -0.1 N.D.
stress Spectinomycin 0.05 mg/ml +0.3 -0.1 -0.6 +0.0 N.D.
nitrogen source L-Valine (N) +0.5 -0.2 -0.3 -0.4 N.D.
carbon source Tween 20 (C) +0.3 -0.1 -0.5 -0.1 N.D.
carbon source octanoate (C) +0.3 +0.1 -0.5 -0.2 N.D.
nitrogen source nitrogen source nitrate 20mM +0.2 -0.2 -0.4 +0.1 N.D.
nitrogen source Putrescine (N) +0.4 -0.1 -0.4 -0.2 N.D.
temperature LB 37C +0.2 +0.2 -0.1 -0.6 N.D.
carbon source L-Alanine (C) +0.4 -0.2 -0.4 -0.1 N.D.
nitrogen source nitrate (N) -0.2 +0.3 -0.4 +0.1 N.D.
nitrogen source L-Methionine (N) +0.4 -0.1 -0.5 +0.1 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A +0.4 -0.3 -0.2 -0.1 N.D.
nitrogen source L-Isoleucine (N) +0.5 -0.2 -0.3 -0.2 N.D.
stress Cephalothin 2.5 mg/ml +0.4 -0.0 -0.3 -0.2 N.D.
carbon source L-Isoleucine (C) +0.4 -0.3 -0.2 +0.0 N.D.
anaerobic Nitrate reduction -0.2 +0.5 -0.1 -0.1 N.D.
carbon source carbon source Sucrose 0.25mM +0.2 -0.3 +0.5 +0.3 N.D.
denitrifying Nitrate reduction, replicate C +0.5 +0.2 +0.4 -0.1 N.D.
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